Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19405

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
4,816,739	-		CA265_RS19400	0.15	+0.2
4,816,772	+		CA265_RS19400	0.18	+0.1
4,816,773	-		CA265_RS19400	0.18	+0.4
4,816,868	-		CA265_RS19400	0.27	+0.0
4,816,896	+		CA265_RS19400	0.29	+0.3
4,816,897	-		CA265_RS19400	0.29	+0.4
4,816,970	+		CA265_RS19400	0.36	+0.4
4,817,111	+		CA265_RS19400	0.49	+0.1
4,817,167	-		CA265_RS19400	0.54	+0.6
4,817,192	+		CA265_RS19400	0.57	-0.1
4,817,193	-		CA265_RS19400	0.57	+0.5
4,817,229	-		CA265_RS19400	0.60	-0.1
4,817,236	+		CA265_RS19400	0.61	+0.4
4,817,237	-		CA265_RS19400	0.61	-0.3
4,817,286	+		CA265_RS19400	0.65	+1.7
4,817,295	+		CA265_RS19400	0.66	-1.4
4,817,361	-		CA265_RS19400	0.72	-0.3
4,817,365	-		CA265_RS19400	0.72	+1.3
4,817,365	-		CA265_RS19400	0.72	-0.2
4,817,418	+		CA265_RS19400	0.77	+0.3
4,817,419	-		CA265_RS19400	0.77	+0.4
4,817,449	-		CA265_RS19400	0.80	-0.6
4,817,453	-		CA265_RS19400	0.81	-0.8
4,817,453	-		CA265_RS19400	0.81	+0.7
4,817,456	+		CA265_RS19400	0.81	-0.9
4,817,457	-		CA265_RS19400	0.81	-0.3
4,817,466	-		CA265_RS19400	0.82	+1.7
4,817,492	+		CA265_RS19400	0.84	-1.3
4,817,525	+		CA265_RS19400	0.87	-0.7
4,817,557	+				+1.5
4,817,606	+				+1.2
4,817,606	+				-1.3
4,817,607	-				-0.6
4,817,645	-				+0.1
4,817,812	+		CA265_RS19405	0.17	-1.7
4,817,812	+		CA265_RS19405	0.17	-2.2
4,817,812	+		CA265_RS19405	0.17	-2.3
4,817,847	-		CA265_RS19405	0.24	-1.1
4,817,877	-		CA265_RS19405	0.30	-1.2
4,817,914	+		CA265_RS19405	0.37	+1.0
4,817,930	-		CA265_RS19405	0.40	-3.4
4,818,037	+		CA265_RS19405	0.61	-1.1
4,818,037	+		CA265_RS19405	0.61	-1.5
4,818,038	-		CA265_RS19405	0.62	-1.3
4,818,058	+		CA265_RS19405	0.65	-2.2
4,818,104	+		CA265_RS19405	0.75	-0.8
4,818,138	-		CA265_RS19405	0.81	-1.3
4,818,138	-		CA265_RS19405	0.81	-2.8
4,818,159	-		CA265_RS19405	0.85	-1.8
4,818,235	+				+0.1
4,818,239	+				-0.8
4,818,240	-				+0.1
4,818,314	+		CA265_RS19410	0.18	+0.2
4,818,315	-		CA265_RS19410	0.18	-0.1
4,818,368	+		CA265_RS19410	0.30	-1.2
4,818,443	+		CA265_RS19410	0.46	-0.2
4,818,577	-		CA265_RS19410	0.76	+0.9
4,818,581	-		CA265_RS19410	0.77	-1.7
4,818,606	+		CA265_RS19410	0.83	-0.3
4,818,672	-				+0.6
4,818,696	-				-0.4
4,818,696	-				+0.3
4,818,733	-				+0.2
4,818,737	-				-0.8
4,818,857	+		CA265_RS19415	0.29	-1.2
4,818,857	+		CA265_RS19415	0.29	-1.3
4,818,858	-		CA265_RS19415	0.30	-1.6
4,818,858	-		CA265_RS19415	0.30	-0.4
4,818,858	-		CA265_RS19415	0.30	-0.9
4,818,945	+		CA265_RS19415	0.65	-0.4
4,819,001	-		CA265_RS19415	0.87	-1.0
4,819,043	-				+0.2
4,819,069	-				+0.6
4,819,075	+				-1.6
4,819,087	+				-0.8
4,819,087	+				-2.2
4,819,087	+				-0.5
4,819,087	+				-0.5
4,819,088	-				+0.8
4,819,119	+				-1.2
4,819,119	+				-0.4
4,819,119	+				+0.6
4,819,119	+				+0.0