Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18135

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
4,526,092	+		CA265_RS18130	0.45	+0.5
4,526,093	-		CA265_RS18130	0.45	+1.6
4,526,141	-		CA265_RS18130	0.49	+0.5
4,526,203	+		CA265_RS18130	0.54	+0.2
4,526,204	-		CA265_RS18130	0.54	+0.4
4,526,232	-		CA265_RS18130	0.56	-0.7
4,526,260	-		CA265_RS18130	0.58	-0.2
4,526,269	+		CA265_RS18130	0.59	+0.9
4,526,286	-		CA265_RS18130	0.60	-0.1
4,526,295	+		CA265_RS18130	0.61	+0.1
4,526,295	+		CA265_RS18130	0.61	+0.7
4,526,322	+		CA265_RS18130	0.63	-0.3
4,526,332	+		CA265_RS18130	0.63	+0.3
4,526,333	-		CA265_RS18130	0.63	+0.7
4,526,335	+		CA265_RS18130	0.64	+1.1
4,526,336	-		CA265_RS18130	0.64	+1.6
4,526,434	+		CA265_RS18130	0.71	-0.3
4,526,483	+		CA265_RS18130	0.75	-0.3
4,526,609	+		CA265_RS18130	0.84	-0.3
4,526,664	-		CA265_RS18130	0.88	-0.2
4,526,680	+		CA265_RS18130	0.90	-0.0
4,526,680	+		CA265_RS18130	0.90	+0.4
4,526,703	-				-0.0
4,526,726	-				+0.2
4,526,775	+				+0.4
4,526,776	-				+2.4
4,526,776	-				+0.6
4,526,776	-				-0.5
4,526,776	-				+0.4
4,526,782	-				-0.1
4,526,782	-				+0.6
4,526,782	-				+1.3
4,526,787	+				+0.5
4,526,787	+				+0.3
4,526,787	+				+1.1
4,526,796	+				-0.2
4,526,823	+				-0.6
4,526,844	-				-1.1
4,526,891	-				+0.1
4,526,929	-				-0.2
4,526,954	-				+0.2
4,527,044	-				+0.3
4,527,055	-				-0.1
4,527,274	-		CA265_RS18135	0.30	-0.4
4,527,385	+		CA265_RS18135	0.44	+0.4
4,527,415	-		CA265_RS18135	0.48	-1.0
4,527,482	-		CA265_RS18135	0.57	-0.4
4,527,482	-		CA265_RS18135	0.57	-2.1
4,527,636	-		CA265_RS18135	0.77	-0.1
4,527,829	-				+0.5
4,527,845	-				+1.1
4,527,913	+				+0.7
4,527,919	+				+0.9
4,527,926	+		CA265_RS18140	0.10	+0.6
4,527,947	+		CA265_RS18140	0.12	+0.5
4,527,997	-		CA265_RS18140	0.17	+0.4
4,528,012	+		CA265_RS18140	0.19	+1.6
4,528,178	-		CA265_RS18140	0.36	+0.2
4,528,178	-		CA265_RS18140	0.36	-0.1
4,528,188	-		CA265_RS18140	0.37	-0.8
4,528,189	+		CA265_RS18140	0.37	+1.3
4,528,189	+		CA265_RS18140	0.37	+0.3
4,528,189	+		CA265_RS18140	0.37	+0.3
4,528,224	+		CA265_RS18140	0.41	-0.5
4,528,224	+		CA265_RS18140	0.41	+0.6
4,528,225	-		CA265_RS18140	0.41	+0.6
4,528,336	+		CA265_RS18140	0.52	+0.6
4,528,343	+		CA265_RS18140	0.53	-0.4
4,528,430	-		CA265_RS18140	0.62	+0.5
4,528,518	+		CA265_RS18140	0.71	+0.4
4,528,518	+		CA265_RS18140	0.71	+0.2
4,528,519	-		CA265_RS18140	0.71	+1.4
4,528,607	-		CA265_RS18140	0.80	+0.9
4,528,686	+		CA265_RS18140	0.88	+0.0
4,528,693	+		CA265_RS18140	0.89	-0.0
4,528,694	-		CA265_RS18140	0.89	+0.6
4,528,721	-				-0.5
4,528,752	-				+1.5
4,528,810	-				-0.4