Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15830

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
3,982,430	-		CA265_RS15825	0.40	-2.1
3,982,525	-		CA265_RS15825	0.46	-0.4
3,982,542	+		CA265_RS15825	0.47	-0.8
3,982,553	-		CA265_RS15825	0.48	-1.1
3,982,561	-		CA265_RS15825	0.49	-1.1
3,982,605	-		CA265_RS15825	0.52	-1.7
3,982,605	-		CA265_RS15825	0.52	-1.4
3,982,617	+		CA265_RS15825	0.52	-0.7
3,982,646	-		CA265_RS15825	0.54	-0.4
3,982,760	-		CA265_RS15825	0.62	-2.1
3,982,760	-		CA265_RS15825	0.62	-1.9
3,982,760	-		CA265_RS15825	0.62	+0.5
3,982,917	+		CA265_RS15825	0.73	+0.8
3,983,084	-		CA265_RS15825	0.84	-1.0
3,983,094	-		CA265_RS15825	0.85	-1.3
3,983,094	-		CA265_RS15825	0.85	-0.1
3,983,102	+		CA265_RS15825	0.85	-0.9
3,983,106	+		CA265_RS15825	0.85	-0.0
3,983,387	+				-1.0
3,983,395	+				-0.2
3,983,523	-				-0.9
3,983,621	+		CA265_RS15830	0.14	-0.0
3,983,622	-		CA265_RS15830	0.14	-0.8
3,983,679	+		CA265_RS15830	0.18	-0.9
3,983,720	-		CA265_RS15830	0.21	-0.5
3,983,982	-		CA265_RS15830	0.39	+1.0
3,983,982	-		CA265_RS15830	0.39	-1.3
3,983,988	+		CA265_RS15830	0.40	-1.7
3,984,023	-		CA265_RS15830	0.42	-1.0
3,984,060	-		CA265_RS15830	0.45	-2.1
3,984,088	-		CA265_RS15830	0.47	-1.8
3,984,221	+		CA265_RS15830	0.56	-0.1
3,984,224	-		CA265_RS15830	0.56	-1.4
3,984,295	+		CA265_RS15830	0.61	-0.5
3,984,296	-		CA265_RS15830	0.61	-1.0
3,984,299	+		CA265_RS15830	0.62	-1.3
3,984,337	-		CA265_RS15830	0.64	-0.7
3,984,398	-		CA265_RS15830	0.69	-2.5
3,984,446	-		CA265_RS15830	0.72	-1.4
3,984,673	-		CA265_RS15830	0.88	-1.0
3,984,748	-				-0.6
3,984,831	-				-1.6
3,984,866	+				-2.1
3,984,879	-				-2.4
3,984,943	+		CA265_RS15835	0.20	+0.5
3,984,944	-		CA265_RS15835	0.21	-1.0
3,984,946	+		CA265_RS15835	0.21	-0.7
3,984,946	+		CA265_RS15835	0.21	-0.4
3,985,067	+		CA265_RS15835	0.56	+3.1
3,985,072	-		CA265_RS15835	0.58	-0.3
3,985,073	+		CA265_RS15835	0.58	+0.0
3,985,138	-		CA265_RS15835	0.77	-1.9
3,985,160	-		CA265_RS15835	0.83	-0.8
3,985,171	-		CA265_RS15835	0.86	-1.0
3,985,226	-				-0.8
3,985,228	-				+0.2
3,985,272	+				-0.7
3,985,370	-		CA265_RS15840	0.12	-0.6
3,985,480	+		CA265_RS15840	0.31	-0.0
3,985,487	-		CA265_RS15840	0.32	-1.2
3,985,538	-		CA265_RS15840	0.41	-1.7
3,985,612	-		CA265_RS15840	0.53	-0.9
3,985,657	-		CA265_RS15840	0.61	-2.4
3,985,736	-		CA265_RS15840	0.74	-0.3
3,985,745	-		CA265_RS15840	0.76	-1.5
3,985,818	-				-0.0