Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15805

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
3,977,348	-		CA265_RS15795	0.82	-2.4
3,977,348	-		CA265_RS15795	0.82	-1.0
3,977,362	-		CA265_RS15795	0.83	-0.3
3,977,430	-		CA265_RS15795	0.87	-1.0
3,977,455	-		CA265_RS15795	0.89	-1.0
3,977,512	-				-3.7
3,977,563	-				-2.5
3,977,588	-				-3.7
3,977,588	-				-2.4
3,977,588	-				-2.6
3,977,640	-				-1.5
3,977,640	-				-0.8
3,977,677	-				-1.3
3,977,693	-				-0.7
3,977,720	-				-0.4
3,977,818	+		CA265_RS15800	0.21	-1.9
3,977,818	+		CA265_RS15800	0.21	-1.6
3,977,821	+		CA265_RS15800	0.22	-1.6
3,978,062	-		CA265_RS15800	0.62	-1.5
3,978,142	-		CA265_RS15800	0.76	-0.5
3,978,152	-		CA265_RS15800	0.78	+0.3
3,978,238	-				-0.8
3,978,281	+				-0.7
3,978,285	-				-2.2
3,978,300	+				+0.0
3,978,304	+				-0.7
3,978,322	+				+2.0
3,978,327	+				+0.4
3,978,406	-				-1.6
3,978,461	-				-0.6
3,978,461	-				-1.5
3,978,465	-				-0.3
3,978,639	+		CA265_RS15805	0.19	-0.5
3,978,640	-		CA265_RS15805	0.19	-1.3
3,978,688	-		CA265_RS15805	0.22	-2.0
3,978,688	-		CA265_RS15805	0.22	-2.9
3,978,731	-		CA265_RS15805	0.24	-1.5
3,978,997	-		CA265_RS15805	0.39	+0.3
3,979,123	-		CA265_RS15805	0.47	-0.2
3,979,133	-		CA265_RS15805	0.47	-1.3
3,979,142	-		CA265_RS15805	0.48	-2.2
3,979,259	-		CA265_RS15805	0.54	-2.8
3,979,259	-		CA265_RS15805	0.54	-1.1
3,979,264	-		CA265_RS15805	0.55	-1.8
3,979,413	-		CA265_RS15805	0.63	-1.5
3,979,442	-		CA265_RS15805	0.65	-2.0
3,979,489	-		CA265_RS15805	0.68	-2.3
3,979,528	-		CA265_RS15805	0.70	-0.8
3,979,577	-		CA265_RS15805	0.73	-1.8
3,979,583	-		CA265_RS15805	0.73	-0.9
3,979,662	-		CA265_RS15805	0.77	-1.9
3,979,662	-		CA265_RS15805	0.77	-1.4
3,979,887	-				-2.5
3,979,939	-				-1.5
3,979,975	-				-1.5
3,979,981	-				-1.6
3,980,259	-		CA265_RS15810	0.24	-0.5
3,980,259	-		CA265_RS15810	0.24	-3.7
3,980,289	-		CA265_RS15810	0.29	-0.6
3,980,381	-		CA265_RS15810	0.43	-1.7
3,980,486	-		CA265_RS15810	0.60	-0.5
3,980,519	-		CA265_RS15810	0.65	-1.4
3,980,585	-		CA265_RS15810	0.75	-0.2
3,980,737	-				-1.1
3,980,761	+				-0.6
3,980,839	+				+0.4
3,980,869	-				-1.7
3,980,923	+		CA265_RS15815	0.21	-0.7
3,980,924	-		CA265_RS15815	0.22	-2.2
3,980,928	+		CA265_RS15815	0.23	+0.3
3,980,998	-		CA265_RS15815	0.41	-0.0
3,981,045	-		CA265_RS15815	0.53	-1.6
3,981,045	-		CA265_RS15815	0.53	-3.5