Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15650

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
3,942,713	+		CA265_RS15645	0.30	+0.4
3,942,713	+		CA265_RS15645	0.30	+1.3
3,942,714	-		CA265_RS15645	0.30	-0.4
3,942,824	+		CA265_RS15645	0.39	+0.3
3,942,885	+		CA265_RS15645	0.43	+0.4
3,942,915	-		CA265_RS15645	0.46	-1.1
3,942,934	+		CA265_RS15645	0.47	-0.1
3,942,934	+		CA265_RS15645	0.47	+0.1
3,942,964	+		CA265_RS15645	0.49	+0.8
3,942,982	+		CA265_RS15645	0.51	-0.1
3,942,983	-		CA265_RS15645	0.51	-0.1
3,942,991	+		CA265_RS15645	0.51	-0.6
3,942,992	-		CA265_RS15645	0.51	+0.2
3,942,992	-		CA265_RS15645	0.51	-1.7
3,943,005	-		CA265_RS15645	0.52	-1.2
3,943,053	-		CA265_RS15645	0.56	-1.5
3,943,082	-		CA265_RS15645	0.58	+0.4
3,943,094	+		CA265_RS15645	0.59	-0.1
3,943,215	-		CA265_RS15645	0.69	-0.7
3,943,261	+		CA265_RS15645	0.72	-0.0
3,943,262	-		CA265_RS15645	0.72	+0.4
3,943,316	+		CA265_RS15645	0.76	+0.3
3,943,317	-		CA265_RS15645	0.76	+0.2
3,943,331	+		CA265_RS15645	0.77	-0.3
3,943,408	+		CA265_RS15645	0.83	-0.9
3,943,437	-		CA265_RS15645	0.86	-1.0
3,943,438	+		CA265_RS15645	0.86	-0.6
3,943,439	-		CA265_RS15645	0.86	-0.4
3,943,450	-		CA265_RS15645	0.87	+0.9
3,943,463	+		CA265_RS15645	0.88	+0.3
3,943,488	+		CA265_RS15645	0.89	-0.1
3,943,548	-				-0.2
3,943,548	-				-0.0
3,943,567	-				-0.3
3,943,665	+				-0.2
3,943,665	+				-0.1
3,943,666	-				-1.7
3,943,669	-				+0.1
3,943,695	+				+0.5
3,943,696	-				-1.6
3,943,710	+				+0.1
3,943,729	+		CA265_RS15650	0.13	+0.7
3,943,921	-		CA265_RS15650	0.45	-1.5
3,943,921	-		CA265_RS15650	0.45	-0.7
3,943,933	-		CA265_RS15650	0.47	-2.3
3,943,957	-		CA265_RS15650	0.51	-1.1
3,944,074	+		CA265_RS15650	0.71	-0.8
3,944,075	-		CA265_RS15650	0.71	-1.2
3,944,075	-		CA265_RS15650	0.71	-1.3
3,944,206	-				-1.5
3,944,230	+				+0.3
3,944,230	+				-0.0
3,944,275	-				-0.0
3,944,306	-				+0.4
3,944,313	+				+0.4
3,944,441	+				-0.4
3,944,453	-				+0.1
3,944,483	-		CA265_RS15655	0.10	-1.6
3,944,698	+		CA265_RS15655	0.23	-0.6
3,944,698	+		CA265_RS15655	0.23	-0.3
3,944,702	+		CA265_RS15655	0.23	-0.0
3,944,703	-		CA265_RS15655	0.23	-0.7
3,944,707	+		CA265_RS15655	0.23	-1.1
3,944,712	+		CA265_RS15655	0.24	-0.5
3,944,712	+		CA265_RS15655	0.24	-0.3
3,944,742	+		CA265_RS15655	0.26	-0.2
3,944,743	-		CA265_RS15655	0.26	-1.0
3,944,743	-		CA265_RS15655	0.26	+0.5
3,944,745	+		CA265_RS15655	0.26	+0.5
3,944,818	-		CA265_RS15655	0.30	+0.0
3,944,818	-		CA265_RS15655	0.30	+1.1
3,944,818	-		CA265_RS15655	0.30	+0.1
3,944,822	+		CA265_RS15655	0.30	+0.1
3,944,823	-		CA265_RS15655	0.30	+0.4
3,944,848	+		CA265_RS15655	0.32	+0.5
3,944,875	+		CA265_RS15655	0.33	-0.0
3,944,875	+		CA265_RS15655	0.33	-0.2
3,944,876	-		CA265_RS15655	0.34	+0.9
3,944,895	-		CA265_RS15655	0.35	-0.3
3,944,904	-		CA265_RS15655	0.35	-1.9
3,944,947	+		CA265_RS15655	0.38	+1.3
3,944,948	-		CA265_RS15655	0.38	+0.2
3,944,959	+		CA265_RS15655	0.38	-0.5
3,944,959	+		CA265_RS15655	0.38	-0.1
3,944,989	-		CA265_RS15655	0.40	-0.7
3,945,119	-		CA265_RS15655	0.48	+0.2
3,945,144	+		CA265_RS15655	0.49	+0.8
3,945,161	-		CA265_RS15655	0.50	+0.6
3,945,173	-		CA265_RS15655	0.51	+0.7
3,945,203	+		CA265_RS15655	0.53	-0.4