Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13240

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
3,289,885	+		CA265_RS13235	0.19	+2.4
3,289,890	-		CA265_RS13235	0.20	+0.6
3,289,934	-		CA265_RS13235	0.25	+0.7
3,289,934	-		CA265_RS13235	0.25	+0.1
3,289,954	+		CA265_RS13235	0.27	-0.2
3,290,056	+		CA265_RS13235	0.39	+0.1
3,290,089	+		CA265_RS13235	0.43	+0.1
3,290,090	-		CA265_RS13235	0.43	+0.1
3,290,172	-		CA265_RS13235	0.53	+0.7
3,290,265	-		CA265_RS13235	0.63	-1.0
3,290,345	-		CA265_RS13235	0.73	+0.9
3,290,345	-		CA265_RS13235	0.73	+1.1
3,290,465	+		CA265_RS13235	0.87	+0.3
3,290,466	-		CA265_RS13235	0.87	+0.2
3,290,471	+		CA265_RS13235	0.87	+0.6
3,290,477	+		CA265_RS13235	0.88	-0.1
3,290,522	-				+1.1
3,290,558	-				-0.3
3,290,560	-				-1.2
3,290,624	-				+0.5
3,290,702	-				-0.6
3,290,733	-				-0.7
3,290,786	+				-2.4
3,290,787	-				+0.1
3,291,025	+		CA265_RS13240	0.74	-1.9
3,291,055	-		CA265_RS13240	0.83	-1.2
3,291,070	-		CA265_RS13240	0.88	+0.1
3,291,092	-				-0.6
3,291,113	+				-2.2
3,291,114	-				-1.3
3,291,117	+				-1.4
3,291,196	+				-1.5
3,291,252	+		CA265_RS13245	0.17	-2.2
3,291,252	+		CA265_RS13245	0.17	-1.9
3,291,252	+		CA265_RS13245	0.17	-3.5
3,291,253	-		CA265_RS13245	0.18	+0.8
3,291,271	-		CA265_RS13245	0.22	-0.8
3,291,290	-		CA265_RS13245	0.26	+1.1
3,291,294	+		CA265_RS13245	0.27	-3.3
3,291,294	+		CA265_RS13245	0.27	-1.7
3,291,349	-		CA265_RS13245	0.39	+0.7
3,291,394	-		CA265_RS13245	0.48	+0.2
3,291,442	+		CA265_RS13245	0.59	-3.2
3,291,508	-		CA265_RS13245	0.73	+0.6
3,291,522	+		CA265_RS13245	0.76	-2.9
3,291,568	-		CA265_RS13245	0.86	+1.1
3,291,634	+				-2.9