Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09810

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
2,419,309	-		CA265_RS09805	0.32	+0.9
2,419,309	-		CA265_RS09805	0.32	-2.7
2,419,462	-		CA265_RS09805	0.43	-0.3
2,419,518	-		CA265_RS09805	0.47	-0.4
2,419,730	-		CA265_RS09805	0.62	-0.7
2,419,868	-		CA265_RS09805	0.72	-0.9
2,419,904	-		CA265_RS09805	0.75	-2.1
2,419,971	-		CA265_RS09805	0.79	-2.2
2,420,263	-				-1.9
2,420,268	-				-1.3
2,420,268	-				-1.6
2,420,357	-				-1.3
2,420,357	-				-1.5
2,420,387	+				-2.1
2,420,387	+				-2.4
2,420,406	+				-0.3
2,420,429	+				-0.3
2,420,454	-		CA265_RS09810	0.10	-1.4
2,420,622	+		CA265_RS09810	0.22	-1.0
2,420,678	+		CA265_RS09810	0.25	-0.1
2,420,694	-		CA265_RS09810	0.26	-2.2
2,420,708	-		CA265_RS09810	0.27	-1.9
2,420,723	+		CA265_RS09810	0.28	-1.2
2,420,724	-		CA265_RS09810	0.28	-2.1
2,420,809	+		CA265_RS09810	0.34	-1.2
2,420,810	-		CA265_RS09810	0.34	-2.1
2,420,853	+		CA265_RS09810	0.37	-1.0
2,420,857	+		CA265_RS09810	0.37	-0.2
2,420,934	+		CA265_RS09810	0.42	-0.7
2,420,935	-		CA265_RS09810	0.42	-0.7
2,420,971	+		CA265_RS09810	0.45	-2.7
2,420,972	-		CA265_RS09810	0.45	-1.3
2,420,972	-		CA265_RS09810	0.45	-2.0
2,421,111	-		CA265_RS09810	0.54	-3.1
2,421,168	-		CA265_RS09810	0.58	-1.5
2,421,378	-		CA265_RS09810	0.71	-1.0
2,421,451	+		CA265_RS09810	0.76	-2.1
2,421,451	+		CA265_RS09810	0.76	-1.3
2,421,481	+		CA265_RS09810	0.78	-0.7
2,421,482	-		CA265_RS09810	0.78	-0.7
2,421,511	+		CA265_RS09810	0.80	-1.3
2,421,542	+		CA265_RS09810	0.82	-1.9
2,421,552	+		CA265_RS09810	0.83	-1.0
2,421,618	+		CA265_RS09810	0.87	-0.4
2,421,714	+				-2.1
2,421,755	+				-0.0
2,421,801	-				-1.0
2,421,808	-				+1.2
2,421,899	-				-1.2
2,421,919	-				-0.6
2,421,924	+				-1.3
2,422,152	-				-0.7
2,422,428	-				+0.8
2,422,453	-		CA265_RS09815	0.75	-0.5
2,422,695	-		CA265_RS09820	0.15	+0.1
2,422,696	-		CA265_RS09820	0.15	-1.6
2,422,699	+		CA265_RS09820	0.16	+0.4
2,422,806	-		CA265_RS09820	0.46	-0.3
2,422,808	+		CA265_RS09820	0.47	-0.5
2,422,808	+		CA265_RS09820	0.47	-0.1
2,422,809	-		CA265_RS09820	0.47	-0.3