Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09140

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
2,277,819	+		CA265_RS09135	0.59	+0.2
2,277,882	+		CA265_RS09135	0.62	-0.1
2,277,885	-		CA265_RS09135	0.62	+0.1
2,277,909	+		CA265_RS09135	0.63	+0.1
2,277,987	+		CA265_RS09135	0.67	+0.3
2,277,987	+		CA265_RS09135	0.67	-0.8
2,277,987	+		CA265_RS09135	0.67	+0.0
2,277,987	+		CA265_RS09135	0.67	-0.0
2,277,988	-		CA265_RS09135	0.67	-0.2
2,277,988	-		CA265_RS09135	0.67	+1.1
2,278,000	+		CA265_RS09135	0.68	-0.3
2,278,001	-		CA265_RS09135	0.68	+0.4
2,278,031	-		CA265_RS09135	0.69	+0.2
2,278,115	-		CA265_RS09135	0.73	-0.3
2,278,127	+		CA265_RS09135	0.74	+0.9
2,278,127	+		CA265_RS09135	0.74	-0.8
2,278,127	+		CA265_RS09135	0.74	+0.2
2,278,128	-		CA265_RS09135	0.74	-0.4
2,278,260	+		CA265_RS09135	0.80	-0.4
2,278,300	-		CA265_RS09135	0.82	-0.2
2,278,304	-		CA265_RS09135	0.83	+0.4
2,278,399	+		CA265_RS09135	0.87	+0.9
2,278,420	+		CA265_RS09135	0.88	-0.1
2,278,530	+				-0.7
2,278,530	+				+1.0
2,278,559	-				-0.9
2,278,594	+				-0.3
2,278,609	+				+1.3
2,278,643	+				+0.7
2,278,713	-				+0.3
2,278,727	-				+0.1
2,278,768	+				+0.2
2,278,771	+				-0.1
2,278,802	+				+0.3
2,278,811	+				-0.0
2,278,865	-		CA265_RS09140	0.16	-1.4
2,278,865	-		CA265_RS09140	0.16	-1.4
2,278,897	-		CA265_RS09140	0.26	-1.0
2,278,906	+		CA265_RS09140	0.29	-0.5
2,278,910	+		CA265_RS09140	0.30	-0.8
2,278,963	-		CA265_RS09140	0.46	+0.0
2,279,088	-		CA265_RS09140	0.83	-0.1
2,279,107	-		CA265_RS09140	0.88	-0.9
2,279,171	+				+0.2
2,279,172	-				-0.1