Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08875

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
2,216,640	-				-0.3
2,216,726	-				-2.7
2,216,735	-				-2.3
2,217,460	-				+0.1
2,217,519	-				+0.6
2,217,634	+		CA265_RS08875	0.21	-1.6
2,217,634	+		CA265_RS08875	0.21	-1.5
2,217,634	+		CA265_RS08875	0.21	-1.6
2,217,653	-		CA265_RS08875	0.26	+0.3
2,217,733	+		CA265_RS08875	0.50	-0.5
2,217,744	-		CA265_RS08875	0.53	-0.2
2,217,748	-		CA265_RS08875	0.54	-0.3
2,217,864	+		CA265_RS08875	0.89	-1.1
2,217,931	-				+0.9
2,217,934	-				+0.8
2,217,955	+				+0.6
2,217,978	+				+0.6
2,217,979	-				+1.0
2,218,010	-				+0.2
2,218,051	+				+0.7
2,218,104	+		CA265_RS08880	0.13	-0.0
2,218,141	+		CA265_RS08880	0.16	-0.6
2,218,195	+		CA265_RS08880	0.21	-0.3
2,218,196	-		CA265_RS08880	0.21	+0.6
2,218,232	-		CA265_RS08880	0.24	-0.2
2,218,232	-		CA265_RS08880	0.24	+0.2
2,218,301	+		CA265_RS08880	0.30	-0.1
2,218,301	+		CA265_RS08880	0.30	-0.3
2,218,302	-		CA265_RS08880	0.30	+1.3
2,218,302	-		CA265_RS08880	0.30	+0.9
2,218,329	+		CA265_RS08880	0.32	-0.4
2,218,329	+		CA265_RS08880	0.32	+0.3
2,218,383	+		CA265_RS08880	0.36	-0.5
2,218,423	-		CA265_RS08880	0.40	+0.5
2,218,434	-		CA265_RS08880	0.40	+0.5
2,218,453	-		CA265_RS08880	0.42	+0.9
2,218,510	-		CA265_RS08880	0.47	+0.7
2,218,510	-		CA265_RS08880	0.47	+1.4
2,218,569	+		CA265_RS08880	0.52	+0.3
2,218,570	-		CA265_RS08880	0.52	+0.9
2,218,598	-		CA265_RS08880	0.54	+0.7
2,218,686	+		CA265_RS08880	0.61	-0.2
2,218,731	-		CA265_RS08880	0.65	-0.2
2,218,809	-		CA265_RS08880	0.71	+0.8
2,218,821	+		CA265_RS08880	0.72	+0.4