Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS07475

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
1,885,635	+				-0.3
1,885,636	-				-0.5
1,885,636	-				+0.1
1,885,636	-				+0.1
1,885,772	-				-0.5
1,885,803	+				+0.8
1,885,812	-				+0.7
1,885,983	-		CA265_RS07470	0.52	-0.6
1,885,997	-		CA265_RS07470	0.59	+0.3
1,886,017	+		CA265_RS07470	0.69	+0.6
1,886,088	-				-0.5
1,886,324	-		CA265_RS07475	0.11	-0.5
1,886,326	-		CA265_RS07475	0.11	-0.3
1,886,329	-		CA265_RS07475	0.12	-1.4
1,886,463	+		CA265_RS07475	0.30	-1.1
1,886,464	-		CA265_RS07475	0.30	+1.3
1,886,466	-		CA265_RS07475	0.31	-1.2
1,886,514	-		CA265_RS07475	0.37	-0.6
1,886,601	-		CA265_RS07475	0.49	+0.8
1,886,637	-		CA265_RS07475	0.54	-1.5
1,886,702	+		CA265_RS07475	0.63	-1.7
1,886,772	-		CA265_RS07475	0.73	-0.9
1,886,841	+		CA265_RS07475	0.82	-0.6
1,886,871	+		CA265_RS07475	0.86	-1.0
1,886,891	+		CA265_RS07475	0.89	-0.6
1,886,942	+				-0.6
1,886,957	+				+0.0
1,886,965	+				-0.7
1,886,965	+				-0.5
1,887,263	+				-0.8
1,887,269	+				+0.3
1,887,358	-				+0.6
1,887,424	+				-1.2
1,887,455	+				-0.3
1,887,474	+		CA265_RS07485	0.12	-1.4
1,887,475	-		CA265_RS07485	0.12	+0.4
1,887,477	+		CA265_RS07485	0.13	-0.7
1,887,478	-		CA265_RS07485	0.13	+0.1
1,887,540	+		CA265_RS07485	0.21	-0.2
1,887,545	+		CA265_RS07485	0.21	+0.8
1,887,558	+		CA265_RS07485	0.23	+1.3
1,887,578	-		CA265_RS07485	0.26	-0.5
1,887,637	-		CA265_RS07485	0.34	-0.0
1,887,700	-		CA265_RS07485	0.42	-0.6
1,887,705	-		CA265_RS07485	0.43	-1.6
1,887,716	+		CA265_RS07485	0.44	+0.1
1,887,770	+		CA265_RS07485	0.51	-1.0
1,887,785	+		CA265_RS07485	0.53	+0.0
1,887,785	+		CA265_RS07485	0.53	-0.3
1,887,804	+		CA265_RS07485	0.56	+0.9
1,887,805	-		CA265_RS07485	0.56	-0.6
1,887,868	-		CA265_RS07485	0.64	+0.1
1,887,880	-		CA265_RS07485	0.66	-0.6
1,887,884	+		CA265_RS07485	0.66	+0.3
1,887,908	+		CA265_RS07485	0.69	+1.4
1,887,908	+		CA265_RS07485	0.69	+2.0
1,887,908	+		CA265_RS07485	0.69	-0.9
1,887,908	+		CA265_RS07485	0.69	-0.1