Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06375

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
1,564,220	-				-1.6
1,564,342	-				-0.4
1,564,398	-				-2.0
1,564,398	-				-0.6
1,564,400	-				-0.1
1,564,431	+				-0.5
1,564,431	+				-0.8
1,564,432	-				-2.0
1,564,496	-				-0.7
1,564,499	+				-2.5
1,564,608	-		CA265_RS06375	0.17	-0.1
1,564,701	-		CA265_RS06375	0.26	-1.7
1,564,787	-		CA265_RS06375	0.33	-1.5
1,564,787	-		CA265_RS06375	0.33	-0.2
1,564,918	+		CA265_RS06375	0.45	-0.7
1,564,921	+		CA265_RS06375	0.45	+0.3
1,564,922	-		CA265_RS06375	0.45	+1.0
1,564,937	+		CA265_RS06375	0.46	-0.9
1,564,997	-		CA265_RS06375	0.52	-0.8
1,565,054	+		CA265_RS06375	0.57	+0.6
1,565,055	-		CA265_RS06375	0.57	-0.5
1,565,057	-		CA265_RS06375	0.57	-1.7
1,565,075	+		CA265_RS06375	0.58	-1.7
1,565,183	-		CA265_RS06375	0.68	-1.1
1,565,219	-		CA265_RS06375	0.71	-0.6
1,565,225	+		CA265_RS06375	0.72	-1.4
1,565,479	-				-2.0
1,565,499	+				-0.8
1,565,506	+				-1.0
1,565,570	-				-0.0
1,565,573	+				-0.5
1,565,660	+				+0.6
1,565,716	-				-0.8
1,565,757	+				-0.8
1,565,810	+				-0.6
1,565,810	+				+0.4
1,565,848	+		CA265_RS06380	0.10	+0.3
1,565,881	-		CA265_RS06380	0.14	-0.3
1,565,881	-		CA265_RS06380	0.14	-0.0
1,565,936	-		CA265_RS06380	0.20	-1.3
1,565,942	-		CA265_RS06380	0.21	-0.1
1,565,947	+		CA265_RS06380	0.22	+0.2
1,566,050	-		CA265_RS06380	0.34	+0.6
1,566,064	-		CA265_RS06380	0.35	-0.8
1,566,069	-		CA265_RS06380	0.36	-0.6
1,566,115	-		CA265_RS06380	0.41	-0.6
1,566,158	+		CA265_RS06380	0.46	+0.3
1,566,158	+		CA265_RS06380	0.46	+0.1
1,566,159	-		CA265_RS06380	0.47	+0.7
1,566,163	-		CA265_RS06380	0.47	+0.2
1,566,189	+		CA265_RS06380	0.50	-1.6
1,566,190	-		CA265_RS06380	0.50	+0.7
1,566,190	-		CA265_RS06380	0.50	+0.2
1,566,195	-		CA265_RS06380	0.51	-0.7
1,566,195	-		CA265_RS06380	0.51	-0.8
1,566,195	-		CA265_RS06380	0.51	+0.4
1,566,266	+		CA265_RS06380	0.59	-0.6
1,566,311	-		CA265_RS06380	0.64	+0.8
1,566,311	-		CA265_RS06380	0.64	+0.1
1,566,335	-		CA265_RS06380	0.67	+0.2
1,566,378	+		CA265_RS06380	0.72	-0.9
1,566,379	-		CA265_RS06380	0.72	-1.5
1,566,412	+		CA265_RS06380	0.76	-0.7