Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06115

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
1,508,304	-		CA265_RS06105	0.77	-0.5
1,508,319	-		CA265_RS06105	0.79	+0.4
1,508,395	+		CA265_RS06105	0.87	-0.1
1,508,395	+		CA265_RS06105	0.87	+0.4
1,508,397	+		CA265_RS06105	0.88	-0.6
1,508,402	+		CA265_RS06105	0.88	-0.6
1,508,403	-		CA265_RS06105	0.88	-0.3
1,508,424	+				-0.0
1,508,451	+				+0.2
1,508,529	-				-0.1
1,508,555	+				+0.2
1,508,556	-				+0.8
1,508,663	+				-1.5
1,508,760	+		CA265_RS06110	0.25	+0.8
1,508,887	+		CA265_RS06110	0.49	-0.5
1,508,915	-		CA265_RS06110	0.54	+0.6
1,508,956	+		CA265_RS06110	0.62	-0.0
1,509,088	+		CA265_RS06110	0.87	+0.2
1,509,103	+		CA265_RS06110	0.90	+0.1
1,509,120	-				-0.8
1,509,135	-				-1.1
1,509,203	-				-0.6
1,509,223	-				-0.4
1,509,249	+				+0.4
1,509,377	+		CA265_RS06115	0.13	-0.5
1,509,408	-		CA265_RS06115	0.18	-0.2
1,509,489	-		CA265_RS06115	0.29	-1.6
1,509,536	+		CA265_RS06115	0.36	-1.6
1,509,537	-		CA265_RS06115	0.36	+0.1
1,509,555	+		CA265_RS06115	0.39	-1.2
1,509,556	+		CA265_RS06115	0.39	-0.9
1,509,556	+		CA265_RS06115	0.39	-2.3
1,509,557	-		CA265_RS06115	0.39	-0.3
1,509,674	+		CA265_RS06115	0.56	-0.9
1,509,674	+				+0.3
1,509,675	-		CA265_RS06115	0.56	-1.2
1,509,675	-		CA265_RS06115	0.56	-0.7
1,509,679	-				+0.3
1,509,679	-		CA265_RS06115	0.56	-0.2
1,509,747	+		CA265_RS06115	0.66	-1.6
1,509,747	+		CA265_RS06115	0.66	-2.0
1,509,747	+		CA265_RS06115	0.66	-1.1
1,509,748	-		CA265_RS06115	0.66	-0.3
1,509,880	-		CA265_RS06115	0.85	-0.9
1,509,930	+				-0.6
1,509,930	+				-1.4
1,509,931	-				-0.8
1,509,973	+				-0.9
1,510,009	-				+0.1
1,510,012	-				+0.3
1,510,191	-				+0.4
1,510,194	+				-0.3
1,510,217	+				-3.2
1,510,218	-				-1.0
1,510,218	-				+0.1
1,510,218	-				-1.0
1,510,291	+		CA265_RS06120	0.14	+0.6
1,510,306	+		CA265_RS06120	0.15	-0.9
1,510,310	+		CA265_RS06120	0.15	-0.9
1,510,311	-		CA265_RS06120	0.16	+0.1
1,510,324	-		CA265_RS06120	0.17	-1.0
1,510,354	+		CA265_RS06120	0.20	-0.1
1,510,437	-		CA265_RS06120	0.27	+0.8
1,510,467	+		CA265_RS06120	0.30	+0.3
1,510,500	+		CA265_RS06120	0.33	-2.2
1,510,500	+		CA265_RS06120	0.33	-0.9
1,510,542	-		CA265_RS06120	0.37	-0.3
1,510,594	+		CA265_RS06120	0.42	-1.4
1,510,625	+		CA265_RS06120	0.45	+0.4
1,510,635	+		CA265_RS06120	0.46	-0.9
1,510,635	+		CA265_RS06120	0.46	-0.5
1,510,723	+		CA265_RS06120	0.55	+0.2
1,510,723	+		CA265_RS06120	0.55	+0.7
1,510,724	-		CA265_RS06120	0.55	-0.1
1,510,724	-		CA265_RS06120	0.55	+0.5
1,510,724	-		CA265_RS06120	0.55	+0.1
1,510,734	+		CA265_RS06120	0.56	-0.4
1,510,734	+		CA265_RS06120	0.56	+1.3
1,510,746	-		CA265_RS06120	0.57	-0.2
1,510,746	-		CA265_RS06120	0.57	-0.3
1,510,762	-		CA265_RS06120	0.58	+0.4
1,510,766	+		CA265_RS06120	0.59	-1.1
1,510,846	+		CA265_RS06120	0.66	-1.3
1,510,867	-		CA265_RS06120	0.68	+0.3
1,510,887	+		CA265_RS06120	0.70	-0.3
1,510,888	-		CA265_RS06120	0.70	-0.6
1,510,937	+		CA265_RS06120	0.75	-0.3
1,510,952	-		CA265_RS06120	0.76	+0.0