Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS05985

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
1,473,297	+				-0.5
1,473,297	+				-0.1
1,473,467	+				-0.2
1,473,467	+				+0.2
1,473,468	-				-0.1
1,473,487	+				+0.5
1,473,487	+				+0.3
1,473,506	-				+1.5
1,473,652	+		CA265_RS05980	0.40	-0.4
1,473,652	+		CA265_RS05980	0.40	+0.1
1,473,653	-		CA265_RS05980	0.40	+0.2
1,473,685	+		CA265_RS05980	0.48	-0.1
1,473,733	-		CA265_RS05980	0.59	-0.2
1,473,733	-		CA265_RS05980	0.59	+0.5
1,473,733	-		CA265_RS05980	0.59	+0.4
1,473,733	-		CA265_RS05980	0.59	+0.7
1,473,736	+		CA265_RS05980	0.60	+0.8
1,473,736	+		CA265_RS05980	0.60	-0.2
1,473,813	-		CA265_RS05980	0.78	+0.9
1,473,903	-				-0.3
1,474,094	-				-1.2
1,474,097	+				-0.7
1,474,099	+				-0.4
1,474,099	+				-0.2
1,474,427	+		CA265_RS05985	0.72	-0.9
1,474,473	+				+0.0
1,474,478	-				+0.0
1,474,478	-				-0.6
1,474,560	+				-0.0
1,474,650	+				+0.3
1,474,659	+				-0.7
1,474,738	+		CA265_RS05990	0.20	+0.4
1,474,738	+		CA265_RS05990	0.20	-0.3
1,474,758	+		CA265_RS05990	0.25	-0.8
1,474,760	+		CA265_RS05990	0.25	-0.2
1,474,760	+		CA265_RS05990	0.25	+0.9
1,474,763	+		CA265_RS05990	0.26	-0.7
1,474,789	+		CA265_RS05990	0.31	-0.3
1,474,798	+		CA265_RS05990	0.33	-1.4
1,474,799	-		CA265_RS05990	0.33	-0.2
1,474,824	+		CA265_RS05990	0.38	+0.0
1,474,824	+		CA265_RS05990	0.38	-0.7
1,474,872	+		CA265_RS05990	0.48	+0.5
1,474,872	+		CA265_RS05990	0.48	-0.0
1,474,908	-		CA265_RS05990	0.55	+0.1
1,474,923	+		CA265_RS05990	0.58	-0.7
1,474,964	+		CA265_RS05990	0.67	-0.4
1,474,968	+		CA265_RS05990	0.67	+0.2
1,474,999	-		CA265_RS05990	0.74	-0.3
1,475,135	+				-0.5
1,475,157	-				-0.4
1,475,173	+				-0.7
1,475,174	-				+0.1
1,475,198	+				+0.6
1,475,203	-				+0.8
1,475,203	-				-0.1
1,475,213	-				-0.3
1,475,217	+				+0.3
1,475,248	-				+0.4
1,475,253	+				-0.4
1,475,254	-				-0.4
1,475,355	-				+0.0
1,475,381	+				-0.4
1,475,384	+				+0.3
1,475,390	+				+0.5
1,475,391	-				-0.3
1,475,472	-				-1.0