Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04610

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
1,099,828	+				+0.7
1,099,828	+				-0.3
1,099,969	-		CA265_RS04605	0.17	-1.4
1,100,024	+		CA265_RS04605	0.23	-0.2
1,100,024	+		CA265_RS04605	0.23	+1.3
1,100,084	+		CA265_RS04605	0.29	-0.6
1,100,084	+		CA265_RS04605	0.29	+0.4
1,100,151	+		CA265_RS04605	0.36	+0.8
1,100,168	+		CA265_RS04605	0.37	-0.9
1,100,261	-		CA265_RS04605	0.47	-0.5
1,100,274	+		CA265_RS04605	0.48	-0.2
1,100,278	+		CA265_RS04605	0.49	-0.2
1,100,278	+		CA265_RS04605	0.49	-0.1
1,100,364	-				-0.9
1,100,366	-		CA265_RS04605	0.57	+0.7
1,100,370	+		CA265_RS04605	0.58	+0.8
1,100,370	+		CA265_RS04605	0.58	-0.0
1,100,371	-		CA265_RS04605	0.58	+0.5
1,100,371	-		CA265_RS04605	0.58	+0.4
1,100,371	-		CA265_RS04605	0.58	+0.4
1,100,412	+		CA265_RS04605	0.62	-0.0
1,100,438	-		CA265_RS04605	0.65	-0.3
1,100,444	+		CA265_RS04605	0.65	+0.3
1,100,444	+		CA265_RS04605	0.65	+0.2
1,100,445	-		CA265_RS04605	0.65	+0.5
1,100,464	+		CA265_RS04605	0.67	-0.3
1,100,509	+		CA265_RS04605	0.72	-0.4
1,100,509	+		CA265_RS04605	0.72	+0.2
1,100,510	-		CA265_RS04605	0.72	+0.5
1,100,510	-		CA265_RS04605	0.72	+0.4
1,100,513	-		CA265_RS04605	0.72	-0.0
1,100,513	-		CA265_RS04605	0.72	-0.7
1,100,513	-		CA265_RS04605	0.72	+0.8
1,100,564	-		CA265_RS04605	0.78	+0.6
1,100,564	-		CA265_RS04605	0.78	-0.2
1,100,578	-		CA265_RS04605	0.79	+0.2
1,100,625	-		CA265_RS04605	0.84	-0.3
1,100,697	+				-0.3
1,100,698	-				+0.1
1,100,788	+				-1.3
1,100,808	+				+1.2
1,100,835	-				-0.3
1,100,840	+				+0.1
1,100,887	+				-0.4
1,100,888	-				-0.1
1,100,918	+		CA265_RS04610	0.11	+0.5
1,100,918	+		CA265_RS04610	0.11	+0.8
1,101,005	-		CA265_RS04610	0.22	-0.0
1,101,106	+		CA265_RS04610	0.33	-0.6
1,101,206	+		CA265_RS04610	0.45	+0.2
1,101,215	-		CA265_RS04610	0.46	-0.0
1,101,269	+		CA265_RS04610	0.53	-0.2
1,101,270	-		CA265_RS04610	0.53	-0.0
1,101,300	-		CA265_RS04610	0.56	+0.1
1,101,304	-		CA265_RS04610	0.57	-1.1
1,101,306	-		CA265_RS04610	0.57	-0.7
1,101,366	+		CA265_RS04610	0.64	-0.1
1,101,367	-		CA265_RS04610	0.64	-1.4
1,101,382	+		CA265_RS04610	0.66	+0.3
1,101,411	+		CA265_RS04610	0.69	-0.6
1,101,432	-		CA265_RS04610	0.72	+0.6
1,101,539	-		CA265_RS04610	0.84	-0.7
1,101,551	-		CA265_RS04610	0.85	-1.3
1,101,587	-		CA265_RS04610	0.90	-0.0
1,101,614	+				-0.4
1,101,614	+				+0.3
1,101,672	+				-1.2
1,101,712	+				+0.1
1,101,713	-				+0.7
1,101,735	+				+0.6
1,101,738	-				+0.4
1,101,738	-				+0.6
1,101,741	+				+0.6
1,101,742	-				-0.3
1,101,885	-		CA265_RS04615	0.16	-0.2
1,101,896	+		CA265_RS04615	0.17	+2.4
1,101,897	-		CA265_RS04615	0.17	+0.3
1,101,946	+		CA265_RS04615	0.21	+0.2
1,101,946	+		CA265_RS04615	0.21	+0.2
1,101,946	+		CA265_RS04615	0.21	+0.5
1,101,947	-		CA265_RS04615	0.21	-0.2
1,101,947	-		CA265_RS04615	0.21	-0.5
1,102,077	-		CA265_RS04615	0.32	-0.0
1,102,188	+		CA265_RS04615	0.42	+0.7
1,102,189	-		CA265_RS04615	0.42	-0.1
1,102,241	+		CA265_RS04615	0.46	-0.1
1,102,253	-		CA265_RS04615	0.47	-0.1
1,102,292	+		CA265_RS04615	0.51	-0.1
1,102,307	+		CA265_RS04615	0.52	+0.7
1,102,511	-		CA265_RS04615	0.70	+0.3
1,102,516	-		CA265_RS04615	0.70	+0.4
1,102,582	-		CA265_RS04615	0.76	-1.2
1,102,628	-		CA265_RS04615	0.80	-0.2
1,102,661	-		CA265_RS04615	0.82	-0.2