Experiment: R2A with Paraquat dichloride 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS03485 and CA265_RS03490 are separated by 56 nucleotides CA265_RS03490 and CA265_RS03495 are separated by 255 nucleotides CA265_RS03495 and CA265_RS03500 are separated by 5 nucleotides
CA265_RS03485: CA265_RS03485 - hypothetical protein, at 840,119 to 842,137
_RS03485
CA265_RS03490: CA265_RS03490 - hypothetical protein, at 842,194 to 842,874
_RS03490
CA265_RS03495: CA265_RS03495 - cytochrome c biogenesis protein, at 843,130 to 843,564
_RS03495
CA265_RS03500: CA265_RS03500 - cytochrome C biogenesis protein, at 843,570 to 846,035
_RS03500
Position (kb) 843
844 Strain fitness (log2 ratio) -1
0
1 at 842.138 kb on + strand at 842.143 kb on - strand at 842.169 kb on - strand at 842.203 kb on + strand at 842.203 kb on + strand at 842.209 kb on + strand at 842.209 kb on + strand at 842.209 kb on + strand at 842.222 kb on - strand at 842.222 kb on - strand at 842.222 kb on - strand at 842.291 kb on - strand, within CA265_RS03490 at 842.351 kb on + strand, within CA265_RS03490 at 842.351 kb on + strand, within CA265_RS03490 at 842.364 kb on + strand, within CA265_RS03490 at 842.460 kb on + strand, within CA265_RS03490 at 842.462 kb on + strand, within CA265_RS03490 at 842.462 kb on + strand, within CA265_RS03490 at 842.463 kb on - strand, within CA265_RS03490 at 842.468 kb on + strand, within CA265_RS03490 at 842.481 kb on + strand, within CA265_RS03490 at 842.526 kb on + strand, within CA265_RS03490 at 842.547 kb on + strand, within CA265_RS03490 at 842.574 kb on - strand, within CA265_RS03490 at 842.599 kb on + strand, within CA265_RS03490 at 842.685 kb on - strand, within CA265_RS03490 at 842.692 kb on + strand, within CA265_RS03490 at 842.693 kb on - strand, within CA265_RS03490 at 842.746 kb on + strand, within CA265_RS03490 at 842.755 kb on + strand, within CA265_RS03490 at 842.755 kb on + strand, within CA265_RS03490 at 842.867 kb on - strand at 842.878 kb on - strand at 842.922 kb on - strand at 843.038 kb on - strand at 843.119 kb on + strand at 843.123 kb on + strand at 843.123 kb on + strand at 843.123 kb on + strand at 843.125 kb on + strand at 843.486 kb on + strand, within CA265_RS03495 at 843.524 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Paraquat dichloride 0.001 mg/ml remove 842,138 + +0.2 842,143 - +0.4 842,169 - +0.4 842,203 + -0.8 842,203 + +0.3 842,209 + -0.5 842,209 + -0.3 842,209 + -0.2 842,222 - +0.7 842,222 - +0.2 842,222 - -0.1 842,291 - CA265_RS03490 0.14 +1.0 842,351 + CA265_RS03490 0.23 +0.0 842,351 + CA265_RS03490 0.23 -0.4 842,364 + CA265_RS03490 0.25 -0.0 842,460 + CA265_RS03490 0.39 -0.3 842,462 + CA265_RS03490 0.39 -1.3 842,462 + CA265_RS03490 0.39 +0.2 842,463 - CA265_RS03490 0.40 +0.4 842,468 + CA265_RS03490 0.40 +1.6 842,481 + CA265_RS03490 0.42 -0.1 842,526 + CA265_RS03490 0.49 +0.1 842,547 + CA265_RS03490 0.52 -0.6 842,574 - CA265_RS03490 0.56 +0.1 842,599 + CA265_RS03490 0.59 -0.5 842,685 - CA265_RS03490 0.72 +0.6 842,692 + CA265_RS03490 0.73 +0.9 842,693 - CA265_RS03490 0.73 -0.3 842,746 + CA265_RS03490 0.81 -0.3 842,755 + CA265_RS03490 0.82 -0.5 842,755 + CA265_RS03490 0.82 -0.6 842,867 - +0.4 842,878 - +0.4 842,922 - +0.1 843,038 - +0.8 843,119 + -0.5 843,123 + -0.3 843,123 + +0.1 843,123 + -1.6 843,125 + -0.7 843,486 + CA265_RS03495 0.82 -0.8 843,524 + -0.3
Or see this region's nucleotide sequence