Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29745
Experiment: Bacitracin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,225,357 | - | BPHYT_RS29740 | 0.39 | -0.8 | |
2,225,360 | - | BPHYT_RS29740 | 0.40 | -1.2 | |
2,225,472 | - | BPHYT_RS29740 | 0.50 | -1.6 | |
2,225,732 | + | BPHYT_RS29740 | 0.74 | -0.1 | |
2,225,869 | + | BPHYT_RS29740 | 0.87 | -1.3 | |
2,225,870 | - | BPHYT_RS29740 | 0.87 | -0.7 | |
2,226,460 | + | BPHYT_RS29745 | 0.38 | -0.2 | |
2,226,673 | + | BPHYT_RS29745 | 0.56 | -2.2 | |
2,227,061 | - | BPHYT_RS29745 | 0.89 | -1.1 | |
2,227,087 | + | -0.3 | |||
2,227,087 | + | +0.4 | |||
2,227,339 | - | -1.1 | |||
2,227,564 | + | BPHYT_RS29750 | 0.22 | -0.8 | |
2,227,565 | - | BPHYT_RS29750 | 0.22 | -1.1 | |
2,227,867 | + | BPHYT_RS29750 | 0.39 | -0.8 | |
2,227,867 | + | BPHYT_RS29750 | 0.39 | -0.9 |
Or see this region's nucleotide sequence