Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26955
Experiment: Bacitracin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.125 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,624,428 | - | BPHYT_RS26950 | 0.33 | +0.1 | |
| 1,624,428 | - | BPHYT_RS26950 | 0.33 | -0.3 | |
| 1,624,541 | - | BPHYT_RS26950 | 0.41 | +0.4 | |
| 1,624,910 | + | BPHYT_RS26950 | 0.67 | +0.4 | |
| 1,624,911 | - | BPHYT_RS26950 | 0.67 | +0.3 | |
| 1,624,913 | - | BPHYT_RS26950 | 0.67 | +1.1 | |
| 1,625,813 | - | BPHYT_RS26955 | 0.39 | -1.3 | |
| 1,626,491 | - | +0.1 | |||
| 1,626,491 | - | +0.4 | |||
| 1,626,500 | - | +0.0 | |||
| 1,626,554 | + | -0.2 | |||
| 1,626,554 | + | +0.3 | |||
| 1,626,856 | + | BPHYT_RS26960 | 0.31 | -0.3 | |
| 1,627,279 | + | BPHYT_RS26960 | 0.78 | +0.1 |
Or see this region's nucleotide sequence