Experiment: Bacitracin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS23700 and BPHYT_RS23705 are separated by 261 nucleotides BPHYT_RS23705 and BPHYT_RS23710 are separated by 113 nucleotides BPHYT_RS23710 and BPHYT_RS23715 are separated by 443 nucleotides
BPHYT_RS23700: BPHYT_RS23700 - peptidase S1, at 885,006 to 886,667
_RS23700
BPHYT_RS23705: BPHYT_RS23705 - hypothetical protein, at 886,929 to 887,582
_RS23705
BPHYT_RS23710: BPHYT_RS23710 - hypothetical protein, at 887,696 to 888,046
_RS23710
BPHYT_RS23715: BPHYT_RS23715 - hypothetical protein, at 888,490 to 888,756
_RS23715
Position (kb) 886
887
888 Strain fitness (log2 ratio) -2
-1
0
1
2 at 886.026 kb on + strand, within BPHYT_RS23700 at 886.095 kb on + strand, within BPHYT_RS23700 at 886.118 kb on - strand, within BPHYT_RS23700 at 886.236 kb on + strand, within BPHYT_RS23700 at 886.236 kb on + strand, within BPHYT_RS23700 at 886.237 kb on - strand, within BPHYT_RS23700 at 886.357 kb on - strand, within BPHYT_RS23700 at 886.450 kb on - strand, within BPHYT_RS23700 at 886.538 kb on + strand at 886.546 kb on - strand at 886.546 kb on - strand at 886.596 kb on + strand at 886.666 kb on - strand at 886.824 kb on - strand at 886.824 kb on - strand at 886.824 kb on - strand at 886.824 kb on - strand at 886.841 kb on - strand at 886.854 kb on + strand at 886.854 kb on + strand at 886.855 kb on - strand at 886.858 kb on + strand at 886.858 kb on + strand at 886.858 kb on + strand at 886.859 kb on - strand at 886.859 kb on - strand at 886.878 kb on + strand at 886.882 kb on + strand at 886.899 kb on + strand at 886.899 kb on + strand at 886.900 kb on - strand at 886.900 kb on - strand at 886.988 kb on + strand at 886.988 kb on + strand at 886.988 kb on + strand at 886.988 kb on + strand at 886.989 kb on - strand at 886.989 kb on - strand at 886.989 kb on - strand at 886.993 kb on - strand at 887.096 kb on - strand, within BPHYT_RS23705 at 887.096 kb on - strand, within BPHYT_RS23705 at 887.096 kb on - strand, within BPHYT_RS23705 at 887.628 kb on - strand at 887.628 kb on - strand at 887.846 kb on + strand, within BPHYT_RS23710 at 888.202 kb on + strand at 888.211 kb on - strand at 888.324 kb on - strand at 888.324 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.125 mg/ml remove 886,026 + BPHYT_RS23700 0.61 -0.3 886,095 + BPHYT_RS23700 0.66 +0.6 886,118 - BPHYT_RS23700 0.67 -0.4 886,236 + BPHYT_RS23700 0.74 -0.4 886,236 + BPHYT_RS23700 0.74 +0.2 886,237 - BPHYT_RS23700 0.74 -2.5 886,357 - BPHYT_RS23700 0.81 -0.3 886,450 - BPHYT_RS23700 0.87 +0.3 886,538 + +0.2 886,546 - -0.7 886,546 - +0.1 886,596 + -0.2 886,666 - +0.6 886,824 - +0.3 886,824 - +0.6 886,824 - +0.5 886,824 - +0.6 886,841 - +0.6 886,854 + +0.4 886,854 + +0.1 886,855 - +0.5 886,858 + -0.0 886,858 + +0.3 886,858 + +0.6 886,859 - +0.6 886,859 - +0.3 886,878 + +0.5 886,882 + +0.6 886,899 + -1.5 886,899 + -0.6 886,900 - +0.7 886,900 - +0.8 886,988 + +0.6 886,988 + +0.8 886,988 + -0.0 886,988 + +0.1 886,989 - +0.1 886,989 - +2.6 886,989 - +0.7 886,993 - +0.9 887,096 - BPHYT_RS23705 0.26 +0.8 887,096 - BPHYT_RS23705 0.26 +0.8 887,096 - BPHYT_RS23705 0.26 +0.6 887,628 - +0.2 887,628 - +0.0 887,846 + BPHYT_RS23710 0.43 +1.0 888,202 + +0.1 888,211 - +0.6 888,324 - +0.0 888,324 - +0.4
Or see this region's nucleotide sequence