Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS21940
Experiment: Bacitracin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
477,835 | - | BPHYT_RS21935 | 0.15 | +0.9 | |
477,835 | - | BPHYT_RS21935 | 0.15 | -0.3 | |
477,835 | - | BPHYT_RS21935 | 0.15 | -2.3 | |
477,836 | + | BPHYT_RS21935 | 0.16 | +0.3 | |
478,274 | - | +2.3 | |||
478,292 | - | +0.0 | |||
478,455 | - | -0.2 | |||
478,745 | + | BPHYT_RS21940 | 0.38 | -1.2 | |
478,961 | + | BPHYT_RS21940 | 0.59 | -0.6 | |
478,992 | - | BPHYT_RS21940 | 0.62 | -0.7 | |
479,964 | + | BPHYT_RS21945 | 0.36 | -0.0 | |
479,964 | + | BPHYT_RS21945 | 0.36 | -0.3 | |
479,965 | - | BPHYT_RS21945 | 0.37 | -0.6 | |
480,029 | + | BPHYT_RS21945 | 0.41 | -0.9 |
Or see this region's nucleotide sequence