Experiment: Bacitracin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS18890 and BPHYT_RS18895 are separated by 92 nucleotides BPHYT_RS18895 and BPHYT_RS18900 are separated by 217 nucleotides BPHYT_RS18900 and BPHYT_RS18905 are separated by 201 nucleotides BPHYT_RS18905 and BPHYT_RS18910 are separated by 94 nucleotides
BPHYT_RS18890: BPHYT_RS18890 - flagellar basal body rod protein FlgC, at 4,244,797 to 4,245,222
_RS18890
BPHYT_RS18895: BPHYT_RS18895 - flagellar basal body rod protein FlgB, at 4,245,315 to 4,245,809
_RS18895
BPHYT_RS18900: BPHYT_RS18900 - flagella basal body P-ring formation protein FlgA, at 4,246,027 to 4,247,541
_RS18900
BPHYT_RS18905: BPHYT_RS18905 - anti-sigma-28 factor FlgM, at 4,247,743 to 4,248,096
_RS18905
BPHYT_RS18910: BPHYT_RS18910 - FlgN, at 4,248,191 to 4,248,637
_RS18910
Position (kb) 4246
4247
4248 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4245.095 kb on + strand, within BPHYT_RS18890 at 4245.096 kb on - strand, within BPHYT_RS18890 at 4245.289 kb on - strand at 4245.316 kb on + strand at 4245.317 kb on - strand at 4245.317 kb on - strand at 4245.437 kb on + strand, within BPHYT_RS18895 at 4245.437 kb on + strand, within BPHYT_RS18895 at 4245.698 kb on - strand, within BPHYT_RS18895 at 4245.698 kb on - strand, within BPHYT_RS18895 at 4245.809 kb on + strand at 4245.809 kb on + strand at 4245.809 kb on + strand at 4245.809 kb on + strand at 4245.810 kb on - strand at 4245.810 kb on - strand at 4245.810 kb on - strand at 4245.810 kb on - strand at 4245.903 kb on + strand at 4245.903 kb on + strand at 4245.903 kb on + strand at 4245.935 kb on + strand at 4245.955 kb on + strand at 4245.955 kb on + strand at 4245.955 kb on + strand at 4245.955 kb on + strand at 4245.955 kb on + strand at 4245.955 kb on + strand at 4245.955 kb on + strand at 4246.290 kb on + strand, within BPHYT_RS18900 at 4246.291 kb on - strand, within BPHYT_RS18900 at 4246.291 kb on - strand, within BPHYT_RS18900 at 4246.291 kb on - strand, within BPHYT_RS18900 at 4246.291 kb on - strand, within BPHYT_RS18900 at 4246.291 kb on - strand, within BPHYT_RS18900 at 4247.051 kb on + strand, within BPHYT_RS18900 at 4247.051 kb on + strand, within BPHYT_RS18900 at 4247.137 kb on + strand, within BPHYT_RS18900 at 4247.137 kb on + strand, within BPHYT_RS18900 at 4247.138 kb on - strand, within BPHYT_RS18900 at 4247.170 kb on + strand, within BPHYT_RS18900 at 4247.170 kb on + strand, within BPHYT_RS18900 at 4247.170 kb on + strand, within BPHYT_RS18900 at 4247.170 kb on + strand, within BPHYT_RS18900 at 4247.170 kb on + strand, within BPHYT_RS18900 at 4247.170 kb on + strand, within BPHYT_RS18900 at 4247.171 kb on - strand, within BPHYT_RS18900 at 4247.171 kb on - strand, within BPHYT_RS18900 at 4247.171 kb on - strand, within BPHYT_RS18900 at 4247.171 kb on - strand, within BPHYT_RS18900 at 4247.171 kb on - strand at 4247.171 kb on - strand, within BPHYT_RS18900 at 4247.173 kb on + strand, within BPHYT_RS18900 at 4247.173 kb on + strand, within BPHYT_RS18900 at 4247.173 kb on + strand, within BPHYT_RS18900 at 4247.173 kb on + strand, within BPHYT_RS18900 at 4247.174 kb on - strand, within BPHYT_RS18900 at 4247.174 kb on - strand, within BPHYT_RS18900 at 4247.174 kb on - strand, within BPHYT_RS18900 at 4247.174 kb on - strand, within BPHYT_RS18900 at 4247.174 kb on - strand, within BPHYT_RS18900 at 4247.174 kb on - strand, within BPHYT_RS18900 at 4247.174 kb on - strand, within BPHYT_RS18900 at 4247.174 kb on - strand, within BPHYT_RS18900 at 4247.656 kb on + strand at 4247.656 kb on + strand at 4247.657 kb on - strand at 4247.657 kb on - strand at 4247.657 kb on - strand at 4247.666 kb on + strand at 4247.712 kb on + strand at 4247.714 kb on + strand at 4247.714 kb on + strand at 4247.714 kb on + strand at 4248.111 kb on + strand at 4248.503 kb on - strand, within BPHYT_RS18910 at 4248.539 kb on + strand, within BPHYT_RS18910 at 4248.540 kb on - strand, within BPHYT_RS18910
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.125 mg/ml remove 4,245,095 + BPHYT_RS18890 0.70 -0.5 4,245,096 - BPHYT_RS18890 0.70 -0.3 4,245,289 - +0.0 4,245,316 + -0.2 4,245,317 - +0.1 4,245,317 - -1.1 4,245,437 + BPHYT_RS18895 0.25 +0.4 4,245,437 + BPHYT_RS18895 0.25 +0.2 4,245,698 - BPHYT_RS18895 0.77 -1.3 4,245,698 - BPHYT_RS18895 0.77 -2.1 4,245,809 + +0.6 4,245,809 + -0.5 4,245,809 + -0.3 4,245,809 + +0.4 4,245,810 - -1.7 4,245,810 - -0.9 4,245,810 - -1.2 4,245,810 - -0.9 4,245,903 + -0.8 4,245,903 + -0.0 4,245,903 + -0.8 4,245,935 + +0.1 4,245,955 + -1.4 4,245,955 + -0.3 4,245,955 + -0.4 4,245,955 + +2.4 4,245,955 + -0.1 4,245,955 + -1.1 4,245,955 + -0.5 4,246,290 + BPHYT_RS18900 0.17 -0.5 4,246,291 - BPHYT_RS18900 0.17 -1.3 4,246,291 - BPHYT_RS18900 0.17 -0.2 4,246,291 - BPHYT_RS18900 0.17 -1.1 4,246,291 - BPHYT_RS18900 0.17 -1.6 4,246,291 - BPHYT_RS18900 0.17 -1.3 4,247,051 + BPHYT_RS18900 0.68 -0.6 4,247,051 + BPHYT_RS18900 0.68 -0.7 4,247,137 + BPHYT_RS18900 0.73 -1.3 4,247,137 + BPHYT_RS18900 0.73 -1.2 4,247,138 - BPHYT_RS18900 0.73 -3.5 4,247,170 + BPHYT_RS18900 0.75 -1.6 4,247,170 + BPHYT_RS18900 0.75 -1.7 4,247,170 + BPHYT_RS18900 0.75 -1.0 4,247,170 + BPHYT_RS18900 0.75 -0.9 4,247,170 + BPHYT_RS18900 0.75 -0.8 4,247,170 + BPHYT_RS18900 0.75 -1.3 4,247,171 - BPHYT_RS18900 0.76 -0.9 4,247,171 - BPHYT_RS18900 0.76 -1.2 4,247,171 - BPHYT_RS18900 0.76 -1.6 4,247,171 - BPHYT_RS18900 0.76 -0.7 4,247,171 - +1.1 4,247,171 - BPHYT_RS18900 0.76 -0.2 4,247,173 + BPHYT_RS18900 0.76 -1.9 4,247,173 + BPHYT_RS18900 0.76 -1.4 4,247,173 + BPHYT_RS18900 0.76 -0.4 4,247,173 + BPHYT_RS18900 0.76 -1.5 4,247,174 - BPHYT_RS18900 0.76 -0.3 4,247,174 - BPHYT_RS18900 0.76 -1.0 4,247,174 - BPHYT_RS18900 0.76 -0.8 4,247,174 - BPHYT_RS18900 0.76 -0.2 4,247,174 - BPHYT_RS18900 0.76 +0.1 4,247,174 - BPHYT_RS18900 0.76 -0.2 4,247,174 - BPHYT_RS18900 0.76 +0.1 4,247,174 - BPHYT_RS18900 0.76 -0.6 4,247,656 + -0.4 4,247,656 + +0.0 4,247,657 - -0.2 4,247,657 - +0.1 4,247,657 - -0.5 4,247,666 + +0.0 4,247,712 + -0.3 4,247,714 + +0.3 4,247,714 + +0.7 4,247,714 + -0.1 4,248,111 + -0.8 4,248,503 - BPHYT_RS18910 0.70 +0.3 4,248,539 + BPHYT_RS18910 0.78 +0.0 4,248,540 - BPHYT_RS18910 0.78 -1.7
Or see this region's nucleotide sequence