Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16445

Experiment: Bacitracin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.125 mg/ml
3,727,204	+				+0.6
3,727,208	+				+1.8
3,727,209	-				-0.6
3,727,306	+				-0.9
3,727,307	-				-0.0
3,727,335	-				+0.1
3,727,335	-				-0.1
3,727,343	+				-0.2
3,727,422	+		BPHYT_RS16440	0.17	-0.2
3,727,422	+		BPHYT_RS16440	0.17	-0.4
3,727,447	-		BPHYT_RS16440	0.21	-0.4
3,727,470	+		BPHYT_RS16440	0.25	-0.4
3,727,470	+		BPHYT_RS16440	0.25	-0.4
3,727,470	+		BPHYT_RS16440	0.25	-0.1
3,727,470	+		BPHYT_RS16440	0.25	-0.1
3,727,470	+		BPHYT_RS16440	0.25	+0.3
3,727,471	-		BPHYT_RS16440	0.25	+0.6
3,727,471	-		BPHYT_RS16440	0.25	-0.5
3,727,471	-		BPHYT_RS16440	0.25	-0.1
3,727,471	-		BPHYT_RS16440	0.25	-0.0
3,727,471	-		BPHYT_RS16440	0.25	+0.8
3,727,475	+		BPHYT_RS16440	0.26	-0.3
3,727,475	+		BPHYT_RS16440	0.26	-0.4
3,727,476	-		BPHYT_RS16440	0.26	+0.1
3,727,489	-		BPHYT_RS16440	0.28	-0.0
3,727,551	+		BPHYT_RS16440	0.38	-0.1
3,727,551	+		BPHYT_RS16440	0.38	-0.6
3,727,551	+		BPHYT_RS16440	0.38	-0.3
3,727,551	+		BPHYT_RS16440	0.38	-0.6
3,727,552	-		BPHYT_RS16440	0.38	-0.1
3,727,552	-		BPHYT_RS16440	0.38	-0.4
3,727,572	+		BPHYT_RS16440	0.42	-0.1
3,727,572	+		BPHYT_RS16440	0.42	-1.0
3,727,572	+		BPHYT_RS16440	0.42	+0.0
3,727,630	+		BPHYT_RS16440	0.51	-0.0
3,727,710	+		BPHYT_RS16440	0.64	-0.3
3,727,710	+		BPHYT_RS16440	0.64	+0.0
3,727,710	+		BPHYT_RS16440	0.64	-0.2
3,727,710	+		BPHYT_RS16440	0.64	-0.1
3,727,711	-		BPHYT_RS16440	0.64	+0.0
3,727,809	+		BPHYT_RS16440	0.80	-0.2
3,727,809	+		BPHYT_RS16440	0.80	+0.0
3,727,810	-		BPHYT_RS16440	0.80	-1.7
3,727,824	+		BPHYT_RS16440	0.82	+0.3
3,727,824	+		BPHYT_RS16440	0.82	-0.3
3,727,824	+		BPHYT_RS16440	0.82	+0.3
3,727,824	+		BPHYT_RS16440	0.82	-0.4
3,727,824	+		BPHYT_RS16440	0.82	+0.4
3,727,865	+		BPHYT_RS16440	0.89	-0.9
3,727,865	+		BPHYT_RS16440	0.89	-0.6
3,727,865	+		BPHYT_RS16440	0.89	-0.8
3,727,865	+		BPHYT_RS16440	0.89	-0.4
3,727,923	+				+0.4
3,727,960	+				+0.0
3,727,960	+				-0.7
3,727,961	-				+0.4
3,727,984	-				-0.5
3,728,092	+				+0.4
3,728,092	+				-0.3
3,728,093	-				+0.0
3,728,147	+				-0.6
3,728,455	-		BPHYT_RS16445	0.20	-0.6
3,728,615	-				+1.1
3,729,139	-		BPHYT_RS16445	0.64	-0.9
3,729,746	-				+0.2
3,729,839	+		BPHYT_RS16450	0.18	+0.5
3,729,840	-		BPHYT_RS16450	0.18	+0.2
3,729,840	-		BPHYT_RS16450	0.18	-0.2
3,729,840	-		BPHYT_RS16450	0.18	-0.3
3,729,907	+		BPHYT_RS16450	0.31	+0.1
3,729,907	+		BPHYT_RS16450	0.31	-0.8
3,729,970	+		BPHYT_RS16450	0.43	+0.0
3,730,063	-		BPHYT_RS16450	0.61	-0.7
3,730,084	+		BPHYT_RS16450	0.65	-0.2
3,730,084	+		BPHYT_RS16450	0.65	-0.2
3,730,084	+		BPHYT_RS16450	0.65	+0.2
3,730,085	-		BPHYT_RS16450	0.65	-0.3
3,730,116	+		BPHYT_RS16450	0.71	+0.3
3,730,116	+		BPHYT_RS16450	0.71	-0.3
3,730,116	+		BPHYT_RS16450	0.71	-0.2
3,730,117	-		BPHYT_RS16450	0.71	-0.5
3,730,117	-		BPHYT_RS16450	0.71	-0.8
3,730,117	-		BPHYT_RS16450	0.71	-0.0
3,730,289	+				-0.1
3,730,331	+				-0.5
3,730,332	-				+0.6
3,730,513	-		BPHYT_RS16455	0.17	+0.3
3,730,534	-		BPHYT_RS16455	0.20	+0.7
3,730,535	+		BPHYT_RS16455	0.20	+0.6
3,730,536	-		BPHYT_RS16455	0.20	-0.0
3,730,680	-		BPHYT_RS16455	0.37	-0.1
3,730,692	-		BPHYT_RS16455	0.39	+0.2