Experiment: Bacitracin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS13240 and BPHYT_RS13245 are separated by 845 nucleotides BPHYT_RS13245 and BPHYT_RS13250 are separated by 460 nucleotides BPHYT_RS13250 and BPHYT_RS13255 are separated by 70 nucleotides
BPHYT_RS13240: BPHYT_RS13240 - multidrug DMT transporter permease, at 3,021,214 to 3,022,140
_RS13240
BPHYT_RS13245: BPHYT_RS13245 - hypothetical protein, at 3,022,986 to 3,024,215
_RS13245
BPHYT_RS13250: BPHYT_RS13250 - hypothetical protein, at 3,024,676 to 3,025,140
_RS13250
BPHYT_RS13255: BPHYT_RS13255 - hypothetical protein, at 3,025,211 to 3,026,494
_RS13255
Position (kb)
3022
3023
3024
3025 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3022.141 kb on + strand at 3022.141 kb on + strand at 3022.471 kb on + strand at 3022.609 kb on + strand at 3023.049 kb on - strand at 3023.113 kb on + strand, within BPHYT_RS13245 at 3023.113 kb on + strand, within BPHYT_RS13245 at 3023.114 kb on - strand, within BPHYT_RS13245 at 3023.114 kb on - strand, within BPHYT_RS13245 at 3023.212 kb on + strand, within BPHYT_RS13245 at 3023.213 kb on - strand, within BPHYT_RS13245 at 3023.213 kb on - strand, within BPHYT_RS13245 at 3024.470 kb on + strand at 3024.471 kb on - strand at 3024.566 kb on + strand at 3024.575 kb on - strand at 3024.575 kb on - strand at 3024.683 kb on + strand at 3024.684 kb on - strand at 3024.684 kb on - strand at 3024.688 kb on - strand at 3024.688 kb on - strand at 3024.694 kb on - strand at 3024.694 kb on - strand at 3024.881 kb on - strand, within BPHYT_RS13250 at 3024.961 kb on + strand, within BPHYT_RS13250
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.125 mg/ml remove 3,022,141 + -1.7 3,022,141 + -0.1 3,022,471 + +0.0 3,022,609 + -0.4 3,023,049 - -2.6 3,023,113 + BPHYT_RS13245 0.10 -5.2 3,023,113 + BPHYT_RS13245 0.10 -0.2 3,023,114 - BPHYT_RS13245 0.10 -1.7 3,023,114 - BPHYT_RS13245 0.10 -3.9 3,023,212 + BPHYT_RS13245 0.18 -2.6 3,023,213 - BPHYT_RS13245 0.18 -5.5 3,023,213 - BPHYT_RS13245 0.18 -5.7 3,024,470 + -1.2 3,024,471 - +0.1 3,024,566 + -0.1 3,024,575 - +0.0 3,024,575 - -1.1 3,024,683 + +1.1 3,024,684 - +0.7 3,024,684 - +0.1 3,024,688 - -0.8 3,024,688 - -0.1 3,024,694 - +0.1 3,024,694 - +0.4 3,024,881 - BPHYT_RS13250 0.44 +0.3 3,024,961 + BPHYT_RS13250 0.61 -0.8
Or see this region's nucleotide sequence