Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09585
Experiment: Bacitracin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,175,167 | + | -0.1 | |||
2,175,167 | + | -0.4 | |||
2,175,260 | + | -1.7 | |||
2,175,261 | - | +0.5 | |||
2,175,267 | - | +0.4 | |||
2,175,267 | - | -1.3 | |||
2,175,286 | - | +0.6 | |||
2,175,286 | - | -0.1 | |||
2,175,413 | + | BPHYT_RS09585 | 0.16 | -1.7 | |
2,175,621 | + | -0.8 | |||
2,175,715 | + | BPHYT_RS09585 | 0.88 | -0.7 | |
2,175,832 | + | -0.0 | |||
2,176,194 | + | -0.0 | |||
2,176,299 | + | BPHYT_RS09590 | 0.28 | -0.4 | |
2,176,300 | - | BPHYT_RS09590 | 0.28 | +0.0 | |
2,176,495 | + | BPHYT_RS09590 | 0.68 | -0.0 | |
2,176,495 | + | BPHYT_RS09590 | 0.68 | +0.1 | |
2,176,561 | + | +1.2 | |||
2,176,562 | - | BPHYT_RS09590 | 0.82 | +0.1 |
Or see this region's nucleotide sequence