Experiment: Bacitracin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS01970 and BPHYT_RS01975 are separated by 248 nucleotides BPHYT_RS01975 and BPHYT_RS01980 are separated by 165 nucleotides
BPHYT_RS01970: BPHYT_RS01970 - methyl-accepting chemotaxis protein, at 444,400 to 446,157
_RS01970
BPHYT_RS01975: BPHYT_RS01975 - hypothetical protein, at 446,406 to 446,639
_RS01975
BPHYT_RS01980: BPHYT_RS01980 - diguanylate cyclase, at 446,805 to 448,337
_RS01980
Position (kb) 446
447 Strain fitness (log2 ratio) -1
0
1 at 445.589 kb on + strand, within BPHYT_RS01970 at 445.601 kb on + strand, within BPHYT_RS01970 at 445.602 kb on - strand, within BPHYT_RS01970 at 445.629 kb on + strand, within BPHYT_RS01970 at 445.769 kb on + strand, within BPHYT_RS01970 at 445.769 kb on + strand, within BPHYT_RS01970 at 445.770 kb on - strand, within BPHYT_RS01970 at 445.909 kb on + strand, within BPHYT_RS01970 at 445.909 kb on + strand, within BPHYT_RS01970 at 445.948 kb on - strand, within BPHYT_RS01970 at 446.055 kb on + strand at 446.095 kb on - strand at 446.239 kb on + strand at 446.264 kb on + strand at 446.264 kb on + strand at 446.264 kb on + strand at 446.383 kb on + strand at 446.383 kb on + strand at 446.383 kb on + strand at 446.384 kb on - strand at 446.384 kb on - strand at 446.437 kb on + strand, within BPHYT_RS01975 at 446.776 kb on + strand at 446.843 kb on + strand at 446.844 kb on - strand at 446.985 kb on + strand, within BPHYT_RS01980 at 446.986 kb on - strand, within BPHYT_RS01980 at 446.986 kb on - strand, within BPHYT_RS01980 at 447.231 kb on + strand, within BPHYT_RS01980 at 447.231 kb on + strand, within BPHYT_RS01980 at 447.231 kb on + strand, within BPHYT_RS01980 at 447.231 kb on + strand, within BPHYT_RS01980 at 447.232 kb on - strand, within BPHYT_RS01980 at 447.232 kb on - strand, within BPHYT_RS01980 at 447.232 kb on - strand, within BPHYT_RS01980 at 447.232 kb on - strand, within BPHYT_RS01980 at 447.355 kb on - strand, within BPHYT_RS01980 at 447.355 kb on - strand, within BPHYT_RS01980 at 447.467 kb on + strand, within BPHYT_RS01980 at 447.467 kb on + strand, within BPHYT_RS01980 at 447.493 kb on - strand, within BPHYT_RS01980 at 447.564 kb on + strand, within BPHYT_RS01980 at 447.565 kb on - strand, within BPHYT_RS01980 at 447.565 kb on - strand, within BPHYT_RS01980 at 447.578 kb on + strand, within BPHYT_RS01980 at 447.579 kb on - strand, within BPHYT_RS01980 at 447.589 kb on - strand, within BPHYT_RS01980 at 447.589 kb on - strand at 447.630 kb on + strand, within BPHYT_RS01980 at 447.631 kb on - strand, within BPHYT_RS01980 at 447.631 kb on - strand, within BPHYT_RS01980
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.125 mg/ml remove 445,589 + BPHYT_RS01970 0.68 +0.7 445,601 + BPHYT_RS01970 0.68 +0.2 445,602 - BPHYT_RS01970 0.68 +0.1 445,629 + BPHYT_RS01970 0.70 -0.8 445,769 + BPHYT_RS01970 0.78 +0.5 445,769 + BPHYT_RS01970 0.78 -0.7 445,770 - BPHYT_RS01970 0.78 -0.8 445,909 + BPHYT_RS01970 0.86 +0.0 445,909 + BPHYT_RS01970 0.86 -0.5 445,948 - BPHYT_RS01970 0.88 -0.6 446,055 + -0.4 446,095 - +0.4 446,239 + -0.4 446,264 + -0.1 446,264 + -0.2 446,264 + -0.3 446,383 + -1.0 446,383 + -0.4 446,383 + -0.5 446,384 - -0.8 446,384 - +0.1 446,437 + BPHYT_RS01975 0.13 -0.8 446,776 + +0.4 446,843 + +0.3 446,844 - +0.6 446,985 + BPHYT_RS01980 0.12 +0.2 446,986 - BPHYT_RS01980 0.12 -1.0 446,986 - BPHYT_RS01980 0.12 -0.3 447,231 + BPHYT_RS01980 0.28 -0.0 447,231 + BPHYT_RS01980 0.28 -0.0 447,231 + BPHYT_RS01980 0.28 -0.3 447,231 + BPHYT_RS01980 0.28 -0.3 447,232 - BPHYT_RS01980 0.28 +0.4 447,232 - BPHYT_RS01980 0.28 +0.0 447,232 - BPHYT_RS01980 0.28 -0.1 447,232 - BPHYT_RS01980 0.28 -0.3 447,355 - BPHYT_RS01980 0.36 -0.2 447,355 - BPHYT_RS01980 0.36 -0.5 447,467 + BPHYT_RS01980 0.43 -1.2 447,467 + BPHYT_RS01980 0.43 -0.4 447,493 - BPHYT_RS01980 0.45 -1.1 447,564 + BPHYT_RS01980 0.50 +0.6 447,565 - BPHYT_RS01980 0.50 +0.3 447,565 - BPHYT_RS01980 0.50 -0.1 447,578 + BPHYT_RS01980 0.50 -0.4 447,579 - BPHYT_RS01980 0.50 +0.4 447,589 - BPHYT_RS01980 0.51 -0.7 447,589 - +1.1 447,630 + BPHYT_RS01980 0.54 -0.1 447,631 - BPHYT_RS01980 0.54 +0.5 447,631 - BPHYT_RS01980 0.54 -0.2
Or see this region's nucleotide sequence