Strain Fitness in Sinorhizobium meliloti 1021 around SMc04341

Experiment: Paraquat dichloride 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.2 mg/ml
2,227,147	+		SMc04324	0.22	+0.2
2,227,147	+		SMc04324	0.22	-0.1
2,227,148	-		SMc04324	0.22	+0.3
2,227,148	-		SMc04324	0.22	+0.1
2,227,362	-		SMc04324	0.77	+0.1
2,227,399	+		SMc04324	0.86	+0.2
2,227,399	+		SMc04324	0.86	+0.9
2,227,399	+		SMc04324	0.86	-1.3
2,227,399	+		SMc04324	0.86	+0.6
2,227,400	-		SMc04324	0.87	+0.6
2,227,400	-		SMc04324	0.87	+0.4
2,227,400	-		SMc04324	0.87	-0.2
2,227,400	-		SMc04324	0.87	+0.4
2,227,400	-		SMc04324	0.87	+1.3
2,227,400	-		SMc04324	0.87	-0.4
2,227,400	-		SMc04324	0.87	-1.1
2,227,401	+		SMc04324	0.87	+0.6
2,227,401	+		SMc04324	0.87	+0.3
2,227,408	+		SMc04324	0.89	-0.6
2,227,408	+		SMc04324	0.89	-0.5
2,227,459	+				-0.1
2,227,459	+				+0.4
2,227,461	+				+1.5
2,227,461	+				+0.1
2,227,461	+				+0.6
2,227,462	-				-0.0
2,227,462	-				-1.4
2,227,462	-				+1.1
2,227,550	+		SMc04338	0.15	+0.1
2,227,550	+		SMc04338	0.15	+0.0
2,227,551	-		SMc04338	0.15	+0.7
2,227,551	-		SMc04338	0.15	+0.6
2,227,551	-		SMc04338	0.15	-0.3
2,227,551	-		SMc04338	0.15	+0.4
2,227,597	+		SMc04338	0.21	-0.0
2,227,597	+		SMc04338	0.21	-1.0
2,227,618	+		SMc04338	0.24	+1.0
2,227,635	+		SMc04338	0.27	-0.8
2,227,636	-		SMc04338	0.27	+0.1
2,227,636	-		SMc04338	0.27	+0.5
2,227,642	-		SMc04338	0.28	-0.0
2,227,965	+		SMc04338	0.74	+0.7
2,227,966	-		SMc04338	0.74	-1.0
2,227,989	+		SMc04338	0.77	+0.3
2,228,019	+				+1.5
2,228,020	-		SMc04338	0.82	-0.2
2,228,225	+				+0.6
2,228,225	+				-0.1
2,228,226	-				-1.3
2,228,226	-				-0.1
2,228,226	-				+0.7
2,228,226	-				+0.0
2,228,226	-				+0.4
2,228,474	+		SMc04341	0.36	+0.1
2,228,474	+		SMc04341	0.36	+3.4
2,228,474	+		SMc04341	0.36	+0.6
2,228,475	-		SMc04341	0.36	+1.2
2,228,475	-		SMc04341	0.36	+0.0
2,228,475	-		SMc04341	0.36	+0.6
2,228,475	-		SMc04341	0.36	+0.3
2,228,480	+		SMc04341	0.37	+0.4
2,228,481	-		SMc04341	0.37	-0.1
2,228,533	+		SMc04341	0.42	+0.4
2,228,573	+		SMc04341	0.46	+0.2
2,228,580	-		SMc04341	0.47	-0.0
2,228,665	-		SMc04341	0.56	-0.3
2,229,117	+				-0.4
2,229,118	-				+0.3
2,229,405	+		SMc04343	0.18	+0.2
2,229,708	-		SMc04343	0.50	+0.2
2,229,708	-		SMc04343	0.50	-0.0
2,229,772	+		SMc04343	0.56	+1.5
2,229,773	-		SMc04343	0.56	+0.9
2,229,773	-		SMc04343	0.56	+0.3
2,229,850	+		SMc04343	0.65	-0.3
2,229,850	+		SMc04343	0.65	-0.9
2,229,964	-		SMc04343	0.77	-0.7
2,229,987	+		SMc04343	0.79	+0.5