Strain Fitness in Sinorhizobium meliloti 1021 around SMc03975

Experiment: Paraquat dichloride 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.2 mg/ml
2,970,283	+		SMc03974	0.28	+0.6
2,970,283	+		SMc03974	0.28	+0.3
2,970,284	-		SMc03974	0.28	+0.8
2,970,284	-		SMc03974	0.28	-1.3
2,970,284	-		SMc03974	0.28	-0.2
2,970,286	+		SMc03974	0.29	-0.4
2,970,708	+				-0.6
2,970,736	-				+0.6
2,970,736	-				-0.5
2,970,736	-				+0.2
2,970,760	-				-0.2
2,970,809	+				+0.3
2,970,871	-				-0.4
2,970,936	+				-0.5
2,970,936	+				-0.3
2,970,936	+				-0.5
2,970,936	+				+0.4
2,970,937	-				-0.3
2,970,937	-				-0.5
2,970,949	+				-0.6
2,970,949	+				+0.7
2,970,950	-				+1.5
2,970,989	+				+0.2
2,970,990	-				-0.5
2,971,008	+				-0.9
2,971,389	+		SMc03975	0.22	-3.4
2,971,390	-		SMc03975	0.23	-0.8
2,971,390	-		SMc03975	0.23	-1.6
2,971,390	-		SMc03975	0.23	+0.7
2,971,518	-		SMc03975	0.36	+1.5
2,971,702	+		SMc03975	0.56	-1.1
2,971,702	+		SMc03975	0.56	-2.0
2,971,703	-		SMc03975	0.56	-0.8
2,971,766	+		SMc03975	0.62	+0.1
2,971,766	+		SMc03975	0.62	+1.3
2,971,767	-		SMc03975	0.63	-1.1
2,971,767	-		SMc03975	0.63	-0.3
2,971,767	-		SMc03975	0.63	-0.3
2,971,767	-		SMc03975	0.63	-0.4
2,971,767	-		SMc03975	0.63	-0.6
2,971,767	-		SMc03975	0.63	-0.6
2,971,769	-		SMc03975	0.63	-0.7
2,971,772	+		SMc03975	0.63	-0.3
2,971,773	-		SMc03975	0.63	-0.4
2,971,830	+		SMc03975	0.69	-0.4
2,971,830	+		SMc03975	0.69	+0.2
2,971,831	-		SMc03975	0.69	-0.5
2,971,848	-		SMc03975	0.71	-0.1
2,971,926	+		SMc03975	0.79	-0.6
2,971,948	+		SMc03975	0.82	+0.5
2,972,122	+				-0.4
2,972,139	-				+0.5
2,972,141	+				-0.7
2,972,142	-				-0.4
2,972,145	+				-0.9
2,972,146	-				+0.1
2,972,146	-				-1.3
2,972,146	-				+0.6
2,972,159	-				+1.3
2,972,159	-				-1.4
2,972,207	+				-0.5
2,972,207	+				+0.7
2,972,208	-				+0.8
2,972,208	-				-0.7
2,972,259	+				-0.8
2,972,261	+				+1.0
2,972,262	-				+0.6
2,972,309	+				+0.3
2,972,309	+				+0.8