Strain Fitness in Sinorhizobium meliloti 1021 around SMc03796
Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,460,432 | - | -1.7 | |||
3,460,457 | - | -0.2 | |||
3,460,538 | + | +1.5 | |||
3,460,723 | - | SMc03795 | 0.23 | -0.9 | |
3,460,902 | + | SMc03795 | 0.53 | +0.8 | |
3,461,148 | + | +0.1 | |||
3,461,246 | + | SMc03796 | 0.13 | -0.7 | |
3,461,300 | + | SMc03796 | 0.28 | -1.3 | |
3,461,307 | - | SMc03796 | 0.29 | -0.4 | |
3,461,307 | - | SMc03796 | 0.29 | -0.7 | |
3,461,423 | + | SMc03796 | 0.60 | -1.0 | |
3,461,424 | - | SMc03796 | 0.60 | -1.5 | |
3,461,426 | + | SMc03796 | 0.61 | -0.0 | |
3,461,426 | + | SMc03796 | 0.61 | -0.5 | |
3,461,426 | + | SMc03796 | 0.61 | -0.3 | |
3,461,427 | - | SMc03796 | 0.61 | -0.2 | |
3,461,427 | - | SMc03796 | 0.61 | +0.0 | |
3,461,921 | + | +0.2 | |||
3,462,006 | - | SMc03797 | 0.17 | -0.8 | |
3,462,006 | - | SMc03797 | 0.17 | +0.2 | |
3,462,006 | - | SMc03797 | 0.17 | +0.2 | |
3,462,173 | - | SMc03797 | 0.34 | +0.7 | |
3,462,173 | - | SMc03797 | 0.34 | +0.4 | |
3,462,173 | - | SMc03797 | 0.34 | +0.2 | |
3,462,173 | - | SMc03797 | 0.34 | -0.7 | |
3,462,355 | + | SMc03797 | 0.52 | +0.6 | |
3,462,442 | + | SMc03797 | 0.61 | +0.6 | |
3,462,442 | + | SMc03797 | 0.61 | -0.1 | |
3,462,572 | + | SMc03797 | 0.74 | -0.8 | |
3,462,573 | - | SMc03797 | 0.74 | -0.3 |
Or see this region's nucleotide sequence