Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03034 and SMc03035 are separated by 15 nucleotides SMc03035 and SMc03036 are separated by 7 nucleotides SMc03036 and SMc03037 are separated by 270 nucleotides
SMc03034: SMc03034 - flagellar basal body L-ring protein, at 729,052 to 729,762
SMc03034
SMc03035: SMc03035 - flagellar transmembrane protein, at 729,778 to 730,269
SMc03035
SMc03036: SMc03036 - flagellar biosynthesis protein FliP, at 730,277 to 731,014
SMc03036
SMc03037: SMc03037 - flagellin A, at 731,285 to 732,469
SMc03037
Position (kb) 730
731
732 Strain fitness (log2 ratio) -1
0
1
2
3 at 729.286 kb on - strand, within SMc03034 at 729.296 kb on + strand, within SMc03034 at 729.296 kb on + strand, within SMc03034 at 729.296 kb on + strand, within SMc03034 at 729.296 kb on + strand, within SMc03034 at 729.297 kb on - strand, within SMc03034 at 729.297 kb on - strand, within SMc03034 at 729.653 kb on - strand, within SMc03034 at 729.653 kb on - strand, within SMc03034 at 729.683 kb on - strand, within SMc03034 at 730.014 kb on + strand at 730.109 kb on + strand, within SMc03035 at 730.129 kb on + strand, within SMc03035 at 730.180 kb on + strand, within SMc03035 at 730.181 kb on - strand, within SMc03035 at 730.300 kb on - strand at 730.531 kb on + strand, within SMc03036 at 730.532 kb on - strand, within SMc03036 at 730.532 kb on - strand, within SMc03036 at 730.568 kb on + strand, within SMc03036 at 730.568 kb on + strand, within SMc03036 at 730.568 kb on + strand, within SMc03036 at 730.568 kb on + strand, within SMc03036 at 730.569 kb on - strand, within SMc03036 at 730.569 kb on - strand, within SMc03036 at 730.569 kb on - strand, within SMc03036 at 730.569 kb on - strand, within SMc03036 at 730.569 kb on - strand, within SMc03036 at 731.247 kb on + strand at 731.284 kb on + strand at 731.330 kb on - strand at 731.780 kb on + strand, within SMc03037 at 731.780 kb on + strand, within SMc03037 at 731.780 kb on + strand, within SMc03037 at 731.781 kb on - strand, within SMc03037 at 731.847 kb on - strand, within SMc03037
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml remove 729,286 - SMc03034 0.33 +0.3 729,296 + SMc03034 0.34 -1.4 729,296 + SMc03034 0.34 +0.2 729,296 + SMc03034 0.34 -0.3 729,296 + SMc03034 0.34 -0.2 729,297 - SMc03034 0.34 -0.1 729,297 - SMc03034 0.34 -1.1 729,653 - SMc03034 0.85 -0.1 729,653 - SMc03034 0.85 +0.4 729,683 - SMc03034 0.89 -0.5 730,014 + +1.8 730,109 + SMc03035 0.67 -0.1 730,129 + SMc03035 0.71 -0.6 730,180 + SMc03035 0.82 +0.8 730,181 - SMc03035 0.82 -0.4 730,300 - -0.5 730,531 + SMc03036 0.34 +0.4 730,532 - SMc03036 0.35 -0.5 730,532 - SMc03036 0.35 +2.2 730,568 + SMc03036 0.39 +0.2 730,568 + SMc03036 0.39 -1.5 730,568 + SMc03036 0.39 -0.5 730,568 + SMc03036 0.39 -0.3 730,569 - SMc03036 0.40 -1.4 730,569 - SMc03036 0.40 +0.2 730,569 - SMc03036 0.40 +1.6 730,569 - SMc03036 0.40 -0.8 730,569 - SMc03036 0.40 +0.5 731,247 + +1.0 731,284 + +0.6 731,330 - -0.9 731,780 + SMc03037 0.42 -0.3 731,780 + SMc03037 0.42 -0.5 731,780 + SMc03037 0.42 -0.1 731,781 - SMc03037 0.42 +3.0 731,847 - SMc03037 0.47 -0.7
Or see this region's nucleotide sequence