Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02909 and SMc02910 are separated by 207 nucleotides SMc02910 and SMc02911 are separated by 222 nucleotides SMc02911 and SMc02912 are separated by 45 nucleotides
SMc02909: SMc02909 - transglycosylase transmembrane protein, at 263,817 to 265,055
SMc02909
SMc02910: SMc02910 - transport transmembrane protein, at 265,263 to 266,918
SMc02910
SMc02911: SMc02911 - hypothetical protein, at 267,141 to 267,758
SMc02911
SMc02912: SMc02912 - transcription elongation factor NusA, at 267,804 to 269,432
SMc02912
Position (kb) 265
266
267 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 264.774 kb on + strand, within SMc02909 at 264.792 kb on + strand, within SMc02909 at 265.157 kb on + strand at 265.429 kb on + strand, within SMc02910 at 265.429 kb on + strand, within SMc02910 at 265.430 kb on - strand, within SMc02910 at 265.453 kb on + strand, within SMc02910 at 265.469 kb on + strand, within SMc02910 at 265.884 kb on + strand, within SMc02910 at 265.884 kb on + strand, within SMc02910 at 265.885 kb on - strand, within SMc02910 at 265.885 kb on - strand, within SMc02910 at 266.014 kb on + strand, within SMc02910 at 266.014 kb on + strand, within SMc02910 at 266.113 kb on + strand, within SMc02910 at 266.113 kb on + strand, within SMc02910 at 266.113 kb on + strand, within SMc02910 at 266.113 kb on + strand, within SMc02910 at 266.169 kb on + strand, within SMc02910 at 266.169 kb on + strand, within SMc02910 at 266.170 kb on - strand, within SMc02910 at 266.242 kb on + strand, within SMc02910 at 266.354 kb on + strand, within SMc02910 at 266.354 kb on + strand, within SMc02910 at 266.587 kb on + strand, within SMc02910 at 266.587 kb on + strand, within SMc02910 at 266.588 kb on - strand, within SMc02910 at 266.588 kb on - strand, within SMc02910 at 266.588 kb on - strand, within SMc02910 at 266.590 kb on + strand, within SMc02910 at 266.591 kb on - strand, within SMc02910 at 266.944 kb on + strand at 266.946 kb on + strand at 267.047 kb on + strand at 267.047 kb on + strand at 267.049 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml remove 264,774 + SMc02909 0.77 +0.3 264,792 + SMc02909 0.79 +0.2 265,157 + -1.2 265,429 + SMc02910 0.10 +1.0 265,429 + SMc02910 0.10 +0.4 265,430 - SMc02910 0.10 -0.8 265,453 + SMc02910 0.11 +0.2 265,469 + SMc02910 0.12 +0.9 265,884 + SMc02910 0.38 +0.7 265,884 + SMc02910 0.38 -0.5 265,885 - SMc02910 0.38 -0.0 265,885 - SMc02910 0.38 -0.8 266,014 + SMc02910 0.45 +0.0 266,014 + SMc02910 0.45 -0.2 266,113 + SMc02910 0.51 +0.4 266,113 + SMc02910 0.51 +0.1 266,113 + SMc02910 0.51 +0.8 266,113 + SMc02910 0.51 -0.3 266,169 + SMc02910 0.55 +0.5 266,169 + SMc02910 0.55 -0.2 266,170 - SMc02910 0.55 +0.0 266,242 + SMc02910 0.59 +0.8 266,354 + SMc02910 0.66 -0.4 266,354 + SMc02910 0.66 +3.1 266,587 + SMc02910 0.80 +0.3 266,587 + SMc02910 0.80 +0.1 266,588 - SMc02910 0.80 -0.1 266,588 - SMc02910 0.80 -1.9 266,588 - SMc02910 0.80 +0.3 266,590 + SMc02910 0.80 +0.6 266,591 - SMc02910 0.80 -1.0 266,944 + +0.5 266,946 + -0.1 267,047 + +0.6 267,047 + -1.9 267,049 + -0.4
Or see this region's nucleotide sequence