Strain Fitness in Sinorhizobium meliloti 1021 around SMc02719
Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,566,269 | + | SMc02717 | 0.76 | +0.1 | |
2,566,269 | + | SMc02717 | 0.76 | -0.8 | |
2,566,270 | - | SMc02717 | 0.76 | -0.0 | |
2,566,299 | - | SMc02717 | 0.78 | -0.7 | |
2,566,558 | + | -0.3 | |||
2,566,559 | - | +0.2 | |||
2,566,559 | - | -0.6 | |||
2,566,626 | + | -1.0 | |||
2,566,627 | - | -1.3 | |||
2,566,709 | + | -0.2 | |||
2,566,866 | + | SMc02718 | 0.61 | -0.2 | |
2,566,866 | + | SMc02718 | 0.61 | +0.3 | |
2,566,978 | + | -0.1 | |||
2,566,979 | - | +0.3 | |||
2,566,980 | + | -1.0 | |||
2,566,981 | - | +0.0 | |||
2,567,037 | + | -0.5 | |||
2,567,038 | - | -0.4 | |||
2,567,038 | - | +0.6 | |||
2,568,094 | - | SMc02719 | 0.82 | -1.6 | |
2,568,479 | - | -1.0 | |||
2,568,521 | - | -0.2 | |||
2,568,521 | - | +0.5 | |||
2,568,521 | - | +0.7 | |||
2,568,550 | + | SMc02720 | 0.12 | -1.5 | |
2,568,757 | + | SMc02720 | 0.48 | -0.0 | |
2,568,757 | + | SMc02720 | 0.48 | +1.2 | |
2,568,758 | - | +0.9 | |||
2,568,758 | - | SMc02720 | 0.48 | -0.1 | |
2,569,101 | - | +0.3 | |||
2,569,101 | - | -0.3 | |||
2,569,151 | + | -0.1 | |||
2,569,151 | + | +0.2 | |||
2,569,152 | - | -1.7 |
Or see this region's nucleotide sequence