Strain Fitness in Sinorhizobium meliloti 1021 around SMc01727
Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
474,295 | + | SMc01728 | 0.15 | +0.1 | |
474,873 | - | SMc01728 | 0.67 | -1.2 | |
474,943 | - | SMc01728 | 0.73 | +0.2 | |
474,943 | - | SMc01728 | 0.73 | -0.4 | |
475,239 | - | +0.0 | |||
475,239 | - | -1.0 | |||
475,275 | - | +1.0 | |||
475,275 | - | +0.4 | |||
475,275 | - | -1.6 | |||
475,345 | - | +1.0 | |||
475,542 | + | SMc01727 | 0.34 | -0.4 | |
475,813 | - | SMc01727 | 0.69 | -1.7 | |
475,910 | - | SMc01727 | 0.82 | -1.5 | |
475,910 | - | SMc01727 | 0.82 | -0.3 | |
475,910 | - | SMc01727 | 0.82 | -1.4 | |
475,975 | - | +0.9 | |||
476,034 | + | -0.6 | |||
476,122 | + | -1.6 | |||
476,188 | + | -0.5 | |||
476,188 | + | -0.0 | |||
476,189 | - | +0.3 | |||
476,556 | + | SMc01726 | 0.35 | +2.2 | |
476,557 | - | SMc01726 | 0.35 | +1.8 | |
476,557 | - | SMc01726 | 0.35 | +2.2 | |
476,557 | - | SMc01726 | 0.35 | +1.3 |
Or see this region's nucleotide sequence