Strain Fitness in Sinorhizobium meliloti 1021 around SMc01218
Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,706,775 | - | -0.2 | |||
1,706,775 | - | +0.7 | |||
1,706,775 | - | +0.2 | |||
1,706,882 | - | -0.3 | |||
1,706,882 | - | -0.1 | |||
1,706,882 | - | -1.2 | |||
1,706,892 | + | +1.7 | |||
1,706,915 | + | -0.4 | |||
1,706,915 | + | -0.2 | |||
1,706,916 | - | -0.1 | |||
1,706,933 | - | -0.6 | |||
1,706,939 | + | +1.1 | |||
1,706,940 | - | -0.6 | |||
1,706,940 | - | -0.3 | |||
1,706,962 | + | +2.5 | |||
1,707,189 | + | SMc01217 | 0.16 | -1.6 | |
1,707,368 | + | SMc01217 | 0.28 | +0.4 | |
1,707,369 | - | SMc01217 | 0.28 | +0.5 | |
1,707,369 | - | SMc01217 | 0.28 | -0.5 | |
1,707,387 | + | SMc01217 | 0.29 | +0.4 | |
1,707,387 | + | SMc01217 | 0.29 | +0.5 | |
1,707,388 | - | SMc01217 | 0.29 | +0.3 | |
1,707,454 | + | SMc01217 | 0.34 | -0.9 | |
1,707,507 | + | SMc01217 | 0.38 | +0.5 | |
1,707,507 | + | SMc01217 | 0.38 | +2.1 | |
1,707,507 | + | SMc01217 | 0.38 | -1.0 | |
1,707,508 | - | SMc01217 | 0.38 | -0.6 | |
1,707,542 | - | SMc01217 | 0.40 | -0.3 | |
1,707,658 | + | SMc01217 | 0.48 | +1.4 | |
1,707,658 | + | SMc01217 | 0.48 | -1.6 | |
1,707,659 | - | SMc01217 | 0.48 | -0.3 | |
1,707,659 | - | SMc01217 | 0.48 | -0.6 |
Or see this region's nucleotide sequence