Strain Fitness in Sinorhizobium meliloti 1021 around SMa1840
Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.2 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,043,726 | + | SMa1838 | 0.31 | -0.1 | |
| 1,043,727 | - | SMa1838 | 0.31 | -2.5 | |
| 1,043,955 | + | SMa1838 | 0.56 | +0.3 | |
| 1,044,046 | + | SMa1838 | 0.66 | +0.4 | |
| 1,044,046 | + | SMa1838 | 0.66 | +0.1 | |
| 1,044,356 | + | -0.8 | |||
| 1,044,387 | + | +0.1 | |||
| 1,044,388 | - | -0.1 | |||
| 1,044,388 | - | -0.5 | |||
| 1,044,430 | + | +0.5 | |||
| 1,044,431 | - | -0.2 | |||
| 1,044,431 | - | +0.2 | |||
| 1,044,658 | - | SMa1840 | 0.58 | -0.6 | |
| 1,044,709 | + | SMa1840 | 0.73 | -0.6 | |
| 1,044,710 | - | SMa1840 | 0.73 | -0.6 | |
| 1,044,710 | - | SMa1840 | 0.73 | +0.3 | |
| 1,044,787 | + | -0.0 | |||
| 1,044,787 | + | -0.5 | |||
| 1,044,788 | - | +0.9 | |||
| 1,044,858 | + | +0.0 | |||
| 1,045,005 | + | -0.3 | |||
| 1,045,103 | - | -0.5 | |||
| 1,045,255 | - | -0.3 | |||
| 1,045,255 | - | -0.1 | |||
| 1,045,255 | - | -0.1 | |||
| 1,045,255 | - | -0.1 | |||
| 1,045,716 | + | SMa1844 | 0.40 | -0.1 | |
| 1,045,717 | - | SMa1844 | 0.40 | +0.0 |
Or see this region's nucleotide sequence