Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1365 and SMa1367 are separated by 154 nucleotides SMa1367 and SMa1368 are separated by 7 nucleotides SMa1368 and SMa1370 overlap by 1 nucleotides SMa1370 and SMa1371 overlap by 4 nucleotides
SMa1365: SMa1365 - ATP-binding protein, at 750,652 to 751,026
SMa1365
SMa1367: SMa1367 - short chain alcohol dehydrogenase-related dehydrogenase, at 751,181 to 751,939
SMa1367
SMa1368: SMa1368 - hypothetical protein, at 751,947 to 752,672
SMa1368
SMa1370: SMa1370 - ABC transporter ATP-binding protein, at 752,672 to 753,655
SMa1370
SMa1371: SMa1371 - ABC transporter ATP-binding protein, at 753,652 to 754,632
SMa1371
Position (kb) 751
752
753 Strain fitness (log2 ratio) -1
0
1 at 750.953 kb on - strand, within SMa1365 at 751.061 kb on - strand at 751.183 kb on - strand at 751.228 kb on + strand at 751.228 kb on + strand at 751.229 kb on - strand at 751.229 kb on - strand at 751.394 kb on + strand, within SMa1367 at 751.395 kb on - strand, within SMa1367 at 751.814 kb on + strand, within SMa1367 at 752.222 kb on + strand, within SMa1368 at 752.222 kb on + strand, within SMa1368 at 752.388 kb on + strand, within SMa1368 at 752.388 kb on + strand, within SMa1368 at 752.489 kb on + strand, within SMa1368 at 752.896 kb on + strand, within SMa1370 at 752.897 kb on - strand, within SMa1370 at 752.898 kb on + strand, within SMa1370 at 752.899 kb on - strand, within SMa1370 at 752.899 kb on - strand, within SMa1370 at 752.908 kb on + strand, within SMa1370 at 752.908 kb on + strand, within SMa1370 at 752.919 kb on + strand, within SMa1370 at 752.920 kb on - strand, within SMa1370 at 752.961 kb on + strand, within SMa1370 at 752.961 kb on + strand, within SMa1370 at 752.961 kb on + strand, within SMa1370 at 752.961 kb on + strand, within SMa1370 at 752.961 kb on + strand, within SMa1370 at 753.024 kb on + strand, within SMa1370 at 753.025 kb on - strand, within SMa1370 at 753.025 kb on - strand, within SMa1370 at 753.030 kb on - strand, within SMa1370 at 753.059 kb on - strand, within SMa1370 at 753.343 kb on + strand, within SMa1370 at 753.345 kb on + strand, within SMa1370 at 753.346 kb on - strand, within SMa1370 at 753.413 kb on - strand, within SMa1370 at 753.609 kb on + strand at 753.610 kb on - strand at 753.656 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml remove 750,953 - SMa1365 0.80 +1.4 751,061 - -0.1 751,183 - -0.2 751,228 + -0.1 751,228 + -1.0 751,229 - -0.2 751,229 - +0.9 751,394 + SMa1367 0.28 -0.5 751,395 - SMa1367 0.28 -0.4 751,814 + SMa1367 0.83 +0.1 752,222 + SMa1368 0.38 +0.9 752,222 + SMa1368 0.38 -1.0 752,388 + SMa1368 0.61 +1.2 752,388 + SMa1368 0.61 +1.0 752,489 + SMa1368 0.75 -1.0 752,896 + SMa1370 0.23 -0.1 752,897 - SMa1370 0.23 +0.8 752,898 + SMa1370 0.23 -0.6 752,899 - SMa1370 0.23 -0.5 752,899 - SMa1370 0.23 -0.6 752,908 + SMa1370 0.24 -0.4 752,908 + SMa1370 0.24 -1.0 752,919 + SMa1370 0.25 +1.1 752,920 - SMa1370 0.25 -1.4 752,961 + SMa1370 0.29 -0.0 752,961 + SMa1370 0.29 +0.9 752,961 + SMa1370 0.29 +0.4 752,961 + SMa1370 0.29 -0.4 752,961 + SMa1370 0.29 +1.4 753,024 + SMa1370 0.36 -0.4 753,025 - SMa1370 0.36 -0.2 753,025 - SMa1370 0.36 -1.1 753,030 - SMa1370 0.36 +0.1 753,059 - SMa1370 0.39 +0.1 753,343 + SMa1370 0.68 +0.2 753,345 + SMa1370 0.68 +0.6 753,346 - SMa1370 0.68 -0.1 753,413 - SMa1370 0.75 +0.6 753,609 + -0.4 753,610 - +0.2 753,656 - -0.9
Or see this region's nucleotide sequence