Strain Fitness in Sinorhizobium meliloti 1021 around SMa0095
Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
48,197 | + | -1.1 | |||
48,197 | + | -0.6 | |||
48,278 | + | SMa0093 | 0.11 | +0.6 | |
48,279 | - | SMa0093 | 0.11 | -0.8 | |
48,279 | - | SMa0093 | 0.11 | -0.1 | |
48,450 | - | SMa0093 | 0.31 | -0.1 | |
48,767 | - | SMa0093 | 0.69 | -0.3 | |
49,005 | - | +0.0 | |||
49,032 | - | -1.6 | |||
49,281 | + | SMa0095 | 0.19 | -1.1 | |
50,007 | + | SMa0095 | 0.89 | -0.6 | |
50,008 | - | SMa0095 | 0.89 | -1.0 | |
50,077 | + | +0.6 | |||
50,180 | + | -0.4 | |||
50,180 | + | -0.5 | |||
50,181 | - | -0.1 | |||
50,181 | - | +0.1 | |||
50,540 | + | SMa0097 | 0.43 | -0.1 | |
50,540 | + | SMa0097 | 0.43 | +2.1 | |
50,541 | - | SMa0097 | 0.43 | -0.5 | |
50,541 | - | SMa0097 | 0.43 | -0.2 | |
50,541 | - | SMa0097 | 0.43 | -0.8 | |
50,583 | - | SMa0097 | 0.47 | -0.2 | |
50,640 | + | SMa0097 | 0.53 | +0.1 | |
50,640 | + | SMa0097 | 0.53 | -0.8 | |
50,640 | + | SMa0097 | 0.53 | +0.5 | |
50,640 | + | SMa0097 | 0.53 | +1.0 | |
50,788 | + | SMa0097 | 0.69 | +0.1 | |
50,789 | - | SMa0097 | 0.69 | +0.6 | |
50,789 | - | SMa0097 | 0.69 | -0.6 | |
50,853 | + | SMa0097 | 0.76 | -0.1 | |
50,853 | + | SMa0097 | 0.76 | -0.5 | |
50,854 | - | SMa0097 | 0.76 | -0.1 | |
50,854 | - | SMa0097 | 0.76 | -0.0 | |
51,119 | + | -0.6 |
Or see this region's nucleotide sequence