Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21632 and SM_b21633 are separated by 92 nucleotides SM_b21633 and SM_b21634 are separated by 33 nucleotides SM_b21634 and SM_b21635 overlap by 4 nucleotides
SM_b21632: SM_b21632 - 3-hydroxyacyl-CoA dehydrogenase, at 1,660,252 to 1,661,568
_b21632
SM_b21633: SM_b21633 - enoyl-CoA hydratase, at 1,661,661 to 1,662,452
_b21633
SM_b21634: SM_b21634 - acyl-CoA thioester hydrolase, at 1,662,486 to 1,662,989
_b21634
SM_b21635: SM_b21635 - bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase, at 1,662,986 to 1,665,052
_b21635
Position (kb)
1662
1663 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1661.681 kb on - strand at 1661.681 kb on - strand at 1661.926 kb on - strand, within SM_b21633 at 1662.393 kb on + strand at 1662.487 kb on + strand at 1662.664 kb on + strand, within SM_b21634 at 1662.751 kb on + strand, within SM_b21634 at 1662.751 kb on + strand, within SM_b21634 at 1662.752 kb on - strand, within SM_b21634 at 1662.839 kb on - strand, within SM_b21634 at 1663.025 kb on + strand at 1663.025 kb on + strand at 1663.025 kb on + strand at 1663.025 kb on + strand at 1663.025 kb on + strand at 1663.026 kb on - strand at 1663.026 kb on - strand at 1663.026 kb on - strand at 1663.026 kb on - strand at 1663.026 kb on - strand at 1663.033 kb on - strand at 1663.159 kb on - strand at 1663.159 kb on - strand at 1663.195 kb on - strand, within SM_b21635 at 1663.204 kb on - strand, within SM_b21635 at 1663.260 kb on + strand, within SM_b21635 at 1663.260 kb on + strand, within SM_b21635 at 1663.333 kb on + strand, within SM_b21635 at 1663.333 kb on + strand, within SM_b21635 at 1663.334 kb on - strand, within SM_b21635 at 1663.539 kb on + strand, within SM_b21635 at 1663.540 kb on - strand, within SM_b21635 at 1663.796 kb on - strand, within SM_b21635 at 1663.800 kb on + strand, within SM_b21635 at 1663.801 kb on - strand, within SM_b21635 at 1663.875 kb on + strand, within SM_b21635 at 1663.875 kb on + strand, within SM_b21635
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml remove 1,661,681 - -0.2 1,661,681 - +1.5 1,661,926 - SM_b21633 0.33 -0.8 1,662,393 + +0.5 1,662,487 + +0.2 1,662,664 + SM_b21634 0.35 -0.6 1,662,751 + SM_b21634 0.53 -0.0 1,662,751 + SM_b21634 0.53 -1.6 1,662,752 - SM_b21634 0.53 -0.3 1,662,839 - SM_b21634 0.70 -1.6 1,663,025 + +0.4 1,663,025 + -1.1 1,663,025 + -0.5 1,663,025 + +0.2 1,663,025 + -1.1 1,663,026 - -0.9 1,663,026 - +0.5 1,663,026 - +0.5 1,663,026 - +1.9 1,663,026 - -0.7 1,663,033 - +1.5 1,663,159 - -0.2 1,663,159 - -1.3 1,663,195 - SM_b21635 0.10 -0.3 1,663,204 - SM_b21635 0.11 -1.9 1,663,260 + SM_b21635 0.13 -0.8 1,663,260 + SM_b21635 0.13 -0.4 1,663,333 + SM_b21635 0.17 -0.1 1,663,333 + SM_b21635 0.17 +0.5 1,663,334 - SM_b21635 0.17 -0.0 1,663,539 + SM_b21635 0.27 +0.1 1,663,540 - SM_b21635 0.27 +0.3 1,663,796 - SM_b21635 0.39 -1.0 1,663,800 + SM_b21635 0.39 +2.0 1,663,801 - SM_b21635 0.39 +0.1 1,663,875 + SM_b21635 0.43 +0.0 1,663,875 + SM_b21635 0.43 +0.2
Or see this region's nucleotide sequence