Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21309 and SM_b21310 are separated by 8 nucleotides SM_b21310 and SM_b21311 are separated by 11 nucleotides
SM_b21309: SM_b21309 - hypothetical protein, at 972,161 to 974,377
_b21309
SM_b21310: SM_b21310 - hypothetical protein, at 974,386 to 975,090
_b21310
SM_b21311: SM_b21311 - glycosyltransferase, at 975,102 to 976,364
_b21311
Position (kb) 974
975
976 Strain fitness (log2 ratio) -1
0
1
2 at 973.435 kb on + strand, within SM_b21309 at 973.436 kb on - strand, within SM_b21309 at 973.436 kb on - strand, within SM_b21309 at 973.568 kb on - strand, within SM_b21309 at 974.074 kb on + strand, within SM_b21309 at 974.074 kb on + strand, within SM_b21309 at 974.145 kb on + strand, within SM_b21309 at 974.284 kb on + strand at 974.285 kb on - strand at 974.380 kb on + strand at 974.380 kb on + strand at 974.380 kb on + strand at 974.380 kb on + strand at 974.381 kb on - strand at 974.625 kb on + strand, within SM_b21310 at 974.626 kb on - strand, within SM_b21310 at 974.858 kb on + strand, within SM_b21310 at 974.859 kb on - strand, within SM_b21310 at 974.859 kb on - strand, within SM_b21310 at 974.943 kb on - strand, within SM_b21310 at 975.045 kb on + strand at 975.045 kb on + strand at 975.045 kb on + strand at 975.046 kb on - strand at 975.046 kb on - strand at 975.104 kb on - strand at 975.152 kb on - strand at 975.337 kb on - strand, within SM_b21311 at 975.647 kb on - strand, within SM_b21311 at 975.789 kb on + strand, within SM_b21311 at 975.789 kb on + strand, within SM_b21311 at 975.790 kb on - strand, within SM_b21311 at 975.958 kb on + strand, within SM_b21311 at 975.959 kb on - strand, within SM_b21311 at 975.961 kb on + strand, within SM_b21311 at 975.961 kb on + strand, within SM_b21311 at 975.962 kb on - strand, within SM_b21311 at 975.962 kb on - strand, within SM_b21311
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml remove 973,435 + SM_b21309 0.57 +2.2 973,436 - SM_b21309 0.58 +0.3 973,436 - SM_b21309 0.58 -0.2 973,568 - SM_b21309 0.63 -0.7 974,074 + SM_b21309 0.86 -0.7 974,074 + SM_b21309 0.86 -0.6 974,145 + SM_b21309 0.89 -0.6 974,284 + +0.3 974,285 - -0.1 974,380 + -0.4 974,380 + -0.6 974,380 + +0.4 974,380 + +0.1 974,381 - -0.6 974,625 + SM_b21310 0.34 -0.0 974,626 - SM_b21310 0.34 +0.9 974,858 + SM_b21310 0.67 +1.6 974,859 - SM_b21310 0.67 +0.1 974,859 - SM_b21310 0.67 +0.6 974,943 - SM_b21310 0.79 +0.4 975,045 + +0.2 975,045 + +1.7 975,045 + +0.5 975,046 - -1.0 975,046 - -1.5 975,104 - +0.7 975,152 - -0.1 975,337 - SM_b21311 0.19 +0.8 975,647 - SM_b21311 0.43 -0.9 975,789 + SM_b21311 0.54 +0.1 975,789 + SM_b21311 0.54 -0.1 975,790 - SM_b21311 0.54 +2.0 975,958 + SM_b21311 0.68 +0.0 975,959 - SM_b21311 0.68 -0.9 975,961 + SM_b21311 0.68 +0.5 975,961 + SM_b21311 0.68 +0.0 975,962 - SM_b21311 0.68 -0.6 975,962 - SM_b21311 0.68 +0.2
Or see this region's nucleotide sequence