Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21029 and SM_b21030 are separated by 144 nucleotides SM_b21030 and SM_b21031 are separated by 11 nucleotides SM_b21031 and SM_b21032 are separated by 20 nucleotides SM_b21032 and SM_b21034 are separated by 473 nucleotides
SM_b21029: SM_b21029 - hypothetical protein, at 649,978 to 650,502
_b21029
SM_b21030: SM_b21030 - hypothetical protein, at 650,647 to 651,096
_b21030
SM_b21031: SM_b21031 - hypothetical protein, at 651,108 to 651,719
_b21031
SM_b21032: SM_b21032 - hypothetical protein, at 651,740 to 652,156
_b21032
SM_b21034: SM_b21034 - hypothetical protein, at 652,630 to 652,914
_b21034
Position (kb) 651
652 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 650.129 kb on - strand, within SM_b21029 at 650.136 kb on + strand, within SM_b21029 at 650.214 kb on - strand, within SM_b21029 at 650.281 kb on - strand, within SM_b21029 at 650.345 kb on + strand, within SM_b21029 at 650.346 kb on - strand, within SM_b21029 at 650.436 kb on + strand, within SM_b21029 at 650.436 kb on + strand, within SM_b21029 at 650.437 kb on - strand, within SM_b21029 at 650.437 kb on - strand, within SM_b21029 at 650.500 kb on + strand at 650.500 kb on + strand at 650.550 kb on + strand at 650.550 kb on + strand at 650.551 kb on - strand at 650.556 kb on + strand at 650.556 kb on + strand at 650.556 kb on + strand at 650.556 kb on + strand at 650.557 kb on - strand at 650.589 kb on - strand at 650.754 kb on + strand, within SM_b21030 at 651.080 kb on - strand at 651.080 kb on - strand at 651.080 kb on - strand at 651.300 kb on + strand, within SM_b21031 at 651.315 kb on + strand, within SM_b21031 at 651.315 kb on + strand, within SM_b21031 at 651.316 kb on - strand, within SM_b21031 at 651.316 kb on - strand, within SM_b21031 at 651.316 kb on - strand, within SM_b21031 at 651.395 kb on + strand, within SM_b21031 at 651.396 kb on - strand, within SM_b21031 at 651.431 kb on + strand, within SM_b21031 at 651.432 kb on - strand, within SM_b21031 at 651.466 kb on - strand, within SM_b21031 at 651.548 kb on + strand, within SM_b21031 at 652.213 kb on + strand at 652.213 kb on + strand at 652.245 kb on - strand at 652.479 kb on - strand at 652.481 kb on + strand at 652.482 kb on - strand at 652.482 kb on - strand at 652.531 kb on - strand at 652.667 kb on - strand, within SM_b21034
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml remove 650,129 - SM_b21029 0.29 -1.0 650,136 + SM_b21029 0.30 +0.8 650,214 - SM_b21029 0.45 -1.0 650,281 - SM_b21029 0.58 -0.3 650,345 + SM_b21029 0.70 -1.0 650,346 - SM_b21029 0.70 -1.4 650,436 + SM_b21029 0.87 +0.1 650,436 + SM_b21029 0.87 +0.9 650,437 - SM_b21029 0.87 -1.0 650,437 - SM_b21029 0.87 +0.5 650,500 + -0.4 650,500 + -0.0 650,550 + +0.9 650,550 + -0.2 650,551 - +0.2 650,556 + +0.0 650,556 + +0.0 650,556 + +0.8 650,556 + +0.3 650,557 - +0.4 650,589 - -1.9 650,754 + SM_b21030 0.24 -0.6 651,080 - -0.1 651,080 - +0.2 651,080 - +0.4 651,300 + SM_b21031 0.31 -0.4 651,315 + SM_b21031 0.34 -0.1 651,315 + SM_b21031 0.34 -0.9 651,316 - SM_b21031 0.34 -0.5 651,316 - SM_b21031 0.34 -0.7 651,316 - SM_b21031 0.34 -0.6 651,395 + SM_b21031 0.47 -0.4 651,396 - SM_b21031 0.47 -1.8 651,431 + SM_b21031 0.53 -3.0 651,432 - SM_b21031 0.53 +0.6 651,466 - SM_b21031 0.58 -0.1 651,548 + SM_b21031 0.72 -1.0 652,213 + -0.1 652,213 + -0.2 652,245 - -1.1 652,479 - +1.3 652,481 + -0.1 652,482 - +0.4 652,482 - -0.9 652,531 - +1.0 652,667 - SM_b21034 0.13 -1.3
Or see this region's nucleotide sequence