Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20492 and SM_b20493 are separated by 114 nucleotides SM_b20493 and SM_b20494 are separated by 122 nucleotides SM_b20494 and SM_b20495 are separated by 880 nucleotides
SM_b20492: SM_b20492 - short-chain oxidoreductase, at 509,567 to 510,469
_b20492
SM_b20493: SM_b20493 - short-chain dehydrogenase, at 510,584 to 511,318
_b20493
SM_b20494: SM_b20494 - transcriptional regulator, at 511,441 to 512,337
_b20494
SM_b20495: SM_b20495 - hypothetical protein, at 513,218 to 514,921
_b20495
Position (kb) 511
512
513 Strain fitness (log2 ratio) -2
-1
0
1
2 at 510.668 kb on + strand, within SM_b20493 at 510.668 kb on + strand, within SM_b20493 at 510.669 kb on - strand, within SM_b20493 at 510.669 kb on - strand, within SM_b20493 at 510.761 kb on - strand, within SM_b20493 at 510.835 kb on + strand, within SM_b20493 at 510.864 kb on + strand, within SM_b20493 at 510.864 kb on + strand, within SM_b20493 at 510.865 kb on - strand, within SM_b20493 at 510.873 kb on + strand, within SM_b20493 at 510.874 kb on - strand, within SM_b20493 at 510.874 kb on - strand, within SM_b20493 at 510.910 kb on + strand, within SM_b20493 at 510.911 kb on - strand, within SM_b20493 at 510.911 kb on - strand, within SM_b20493 at 510.911 kb on - strand, within SM_b20493 at 510.911 kb on - strand, within SM_b20493 at 510.911 kb on - strand, within SM_b20493 at 510.911 kb on - strand, within SM_b20493 at 510.911 kb on - strand, within SM_b20493 at 510.983 kb on + strand, within SM_b20493 at 511.216 kb on - strand, within SM_b20493 at 511.302 kb on - strand at 511.319 kb on - strand at 511.319 kb on - strand at 511.434 kb on - strand at 511.458 kb on + strand at 511.459 kb on - strand at 511.539 kb on + strand, within SM_b20494 at 511.540 kb on - strand, within SM_b20494 at 511.633 kb on + strand, within SM_b20494 at 511.633 kb on + strand, within SM_b20494 at 511.633 kb on + strand, within SM_b20494 at 511.633 kb on + strand, within SM_b20494 at 511.633 kb on + strand, within SM_b20494 at 511.634 kb on - strand, within SM_b20494 at 511.634 kb on - strand, within SM_b20494 at 511.636 kb on + strand, within SM_b20494 at 511.699 kb on - strand, within SM_b20494 at 511.699 kb on - strand, within SM_b20494 at 511.720 kb on - strand, within SM_b20494 at 511.807 kb on - strand, within SM_b20494 at 511.807 kb on - strand, within SM_b20494 at 511.849 kb on + strand, within SM_b20494 at 511.985 kb on + strand, within SM_b20494 at 511.986 kb on - strand, within SM_b20494 at 511.986 kb on - strand, within SM_b20494 at 512.205 kb on - strand at 512.213 kb on + strand, within SM_b20494 at 512.214 kb on - strand, within SM_b20494 at 512.254 kb on + strand at 512.254 kb on + strand at 512.254 kb on + strand at 512.255 kb on - strand at 512.526 kb on + strand at 512.526 kb on + strand at 512.529 kb on + strand at 512.530 kb on - strand at 512.530 kb on - strand at 512.553 kb on + strand at 512.561 kb on + strand at 512.562 kb on - strand at 512.614 kb on - strand at 512.614 kb on - strand at 512.707 kb on + strand at 512.707 kb on + strand at 512.707 kb on + strand at 512.732 kb on + strand at 512.748 kb on + strand at 513.061 kb on + strand at 513.061 kb on + strand at 513.062 kb on - strand at 513.103 kb on + strand at 513.246 kb on + strand at 513.293 kb on + strand at 513.294 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml remove 510,668 + SM_b20493 0.11 -0.6 510,668 + SM_b20493 0.11 +0.2 510,669 - SM_b20493 0.12 -0.1 510,669 - SM_b20493 0.12 +1.7 510,761 - SM_b20493 0.24 +0.2 510,835 + SM_b20493 0.34 -0.2 510,864 + SM_b20493 0.38 -0.1 510,864 + SM_b20493 0.38 -1.8 510,865 - SM_b20493 0.38 -0.1 510,873 + SM_b20493 0.39 +1.8 510,874 - SM_b20493 0.39 -0.6 510,874 - SM_b20493 0.39 +0.1 510,910 + SM_b20493 0.44 -0.3 510,911 - SM_b20493 0.44 -0.1 510,911 - SM_b20493 0.44 +0.2 510,911 - SM_b20493 0.44 -1.3 510,911 - SM_b20493 0.44 +0.0 510,911 - SM_b20493 0.44 -0.5 510,911 - SM_b20493 0.44 +0.0 510,911 - SM_b20493 0.44 +1.3 510,983 + SM_b20493 0.54 +1.0 511,216 - SM_b20493 0.86 -0.7 511,302 - -0.3 511,319 - -0.1 511,319 - -0.0 511,434 - -0.0 511,458 + -0.3 511,459 - -0.2 511,539 + SM_b20494 0.11 +1.4 511,540 - SM_b20494 0.11 -0.1 511,633 + SM_b20494 0.21 -0.1 511,633 + SM_b20494 0.21 -0.4 511,633 + SM_b20494 0.21 +1.7 511,633 + SM_b20494 0.21 +2.2 511,633 + SM_b20494 0.21 +0.6 511,634 - SM_b20494 0.22 -0.2 511,634 - SM_b20494 0.22 +0.1 511,636 + SM_b20494 0.22 -0.8 511,699 - SM_b20494 0.29 -0.0 511,699 - SM_b20494 0.29 +0.0 511,720 - SM_b20494 0.31 +0.8 511,807 - SM_b20494 0.41 +1.1 511,807 - SM_b20494 0.41 +0.2 511,849 + SM_b20494 0.45 -0.2 511,985 + SM_b20494 0.61 +0.6 511,986 - SM_b20494 0.61 -0.5 511,986 - SM_b20494 0.61 +0.6 512,205 - +0.7 512,213 + SM_b20494 0.86 +0.1 512,214 - SM_b20494 0.86 -0.5 512,254 + -0.6 512,254 + -0.9 512,254 + +0.5 512,255 - +0.1 512,526 + -0.2 512,526 + +0.8 512,529 + +0.1 512,530 - +0.2 512,530 - -1.4 512,553 + -1.9 512,561 + +0.4 512,562 - -0.9 512,614 - -0.9 512,614 - -0.4 512,707 + -0.5 512,707 + +0.3 512,707 + +0.1 512,732 + +2.0 512,748 + +0.2 513,061 + +0.1 513,061 + -1.0 513,062 - +0.2 513,103 + -0.1 513,246 + +0.2 513,293 + -0.9 513,294 - +1.3
Or see this region's nucleotide sequence