Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20065 and SM_b20066 are separated by 166 nucleotides SM_b20066 and SM_b20067 are separated by 3 nucleotides SM_b20067 and SM_b20068 are separated by 214 nucleotides SM_b20068 and SM_b20069 are separated by 533 nucleotides
SM_b20065: SM_b20065 - hypothetical protein, at 73,972 to 74,370
_b20065
SM_b20066: SM_b20066 - hypothetical protein, at 74,537 to 74,722
_b20066
SM_b20067: SM_b20067 - hypothetical protein, at 74,726 to 75,247
_b20067
SM_b20068: SM_b20068 - hypothetical protein, at 75,462 to 75,671
_b20068
SM_b20069: SM_b20069 - amino acid carrier protein, at 76,205 to 77,608
_b20069
Position (kb)
74
75
76 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 73.752 kb on + strand at 73.752 kb on + strand at 73.752 kb on + strand at 73.752 kb on + strand at 73.752 kb on + strand at 73.753 kb on - strand at 73.757 kb on - strand at 73.849 kb on + strand at 73.971 kb on + strand at 73.971 kb on + strand at 73.972 kb on - strand at 73.972 kb on - strand at 74.260 kb on + strand at 74.395 kb on - strand at 74.412 kb on - strand at 74.611 kb on - strand at 74.832 kb on + strand, within SM_b20067 at 74.833 kb on - strand, within SM_b20067 at 74.833 kb on - strand, within SM_b20067 at 74.930 kb on - strand, within SM_b20067 at 75.088 kb on + strand, within SM_b20067 at 75.089 kb on - strand, within SM_b20067 at 75.119 kb on + strand, within SM_b20067 at 75.134 kb on - strand, within SM_b20067 at 75.134 kb on - strand, within SM_b20067 at 75.371 kb on + strand at 75.808 kb on + strand at 75.838 kb on + strand at 75.839 kb on - strand at 75.839 kb on - strand at 75.839 kb on - strand at 75.839 kb on - strand at 75.839 kb on - strand at 75.839 kb on - strand at 75.839 kb on - strand at 75.924 kb on + strand at 75.924 kb on + strand at 75.940 kb on - strand at 75.964 kb on + strand at 75.964 kb on + strand at 75.964 kb on + strand at 75.964 kb on + strand at 75.964 kb on + strand at 75.964 kb on + strand at 75.964 kb on + strand at 75.965 kb on - strand at 75.965 kb on - strand at 75.965 kb on - strand at 75.965 kb on - strand at 75.968 kb on + strand at 75.968 kb on + strand at 75.968 kb on + strand at 75.968 kb on + strand at 75.968 kb on + strand at 75.969 kb on - strand at 75.969 kb on - strand at 75.998 kb on + strand at 75.998 kb on + strand at 75.999 kb on - strand at 75.999 kb on - strand at 75.999 kb on - strand at 76.228 kb on + strand at 76.228 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml remove 73,752 + +1.0 73,752 + -0.9 73,752 + +0.5 73,752 + -1.0 73,752 + +0.1 73,753 - -0.2 73,757 - -0.6 73,849 + -1.4 73,971 + +0.1 73,971 + -0.1 73,972 - +1.5 73,972 - -0.5 74,260 + +1.2 74,395 - -2.5 74,412 - +0.2 74,611 - +1.4 74,832 + SM_b20067 0.20 +0.7 74,833 - SM_b20067 0.20 -0.7 74,833 - SM_b20067 0.20 -0.6 74,930 - SM_b20067 0.39 -0.7 75,088 + SM_b20067 0.69 -1.1 75,089 - SM_b20067 0.70 -0.7 75,119 + SM_b20067 0.75 +0.0 75,134 - SM_b20067 0.78 -0.1 75,134 - SM_b20067 0.78 -0.8 75,371 + -0.1 75,808 + -0.2 75,838 + +0.8 75,839 - +2.6 75,839 - -0.7 75,839 - -0.3 75,839 - -1.1 75,839 - -2.6 75,839 - -0.1 75,839 - +0.1 75,924 + -1.3 75,924 + +0.6 75,940 - +0.1 75,964 + -0.1 75,964 + +1.2 75,964 + +0.0 75,964 + +0.5 75,964 + +0.9 75,964 + -1.7 75,964 + -0.6 75,965 - -0.3 75,965 - -0.3 75,965 - +1.5 75,965 - +0.4 75,968 + -0.4 75,968 + -1.5 75,968 + +0.9 75,968 + -1.8 75,968 + +0.2 75,969 - +1.8 75,969 - -1.1 75,998 + -0.4 75,998 + +0.2 75,999 - +0.6 75,999 - +0.3 75,999 - -0.9 76,228 + -0.7 76,228 + +0.7
Or see this region's nucleotide sequence