Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20006
Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
8,092 | + | +0.5 | |||
8,093 | - | -0.2 | |||
8,093 | - | +0.5 | |||
8,298 | + | -2.0 | |||
8,298 | + | +1.1 | |||
8,298 | + | +0.2 | |||
8,299 | - | +0.4 | |||
8,499 | + | SM_b20005 | 0.34 | -0.2 | |
8,764 | - | SM_b20005 | 0.78 | -0.5 | |
8,770 | - | SM_b20005 | 0.79 | +2.4 | |
8,774 | - | SM_b20005 | 0.79 | -0.8 | |
8,812 | - | SM_b20005 | 0.85 | -0.4 | |
9,500 | - | SM_b20006 | 0.43 | -0.2 | |
9,561 | - | SM_b20006 | 0.50 | -1.5 | |
9,695 | + | SM_b20006 | 0.64 | -1.1 | |
10,009 | - | -1.6 | |||
10,078 | - | +1.1 | |||
10,183 | + | -1.6 | |||
10,183 | + | -0.1 | |||
10,339 | + | +0.1 | |||
10,428 | - | SM_b20007 | 0.13 | -0.3 | |
10,686 | + | SM_b20007 | 0.25 | +0.1 | |
10,686 | + | SM_b20007 | 0.25 | -0.3 | |
10,686 | + | SM_b20007 | 0.25 | -0.2 | |
10,687 | - | SM_b20007 | 0.25 | +0.7 | |
10,687 | - | SM_b20007 | 0.25 | +0.1 | |
10,687 | - | SM_b20007 | 0.25 | +0.2 | |
10,695 | + | SM_b20007 | 0.26 | -0.3 | |
10,696 | - | SM_b20007 | 0.26 | +0.4 |
Or see this region's nucleotide sequence