Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10360

Experiment: R2A with Selective_ion_mix_1 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Selective_ion_mix_1 1 X
2,282,258	+		LRK54_RS10355	0.47	+0.3
2,282,259	-		LRK54_RS10355	0.47	+0.9
2,282,259	-		LRK54_RS10355	0.47	+1.2
2,282,261	+		LRK54_RS10355	0.47	+1.3
2,282,261	+		LRK54_RS10355	0.47	+0.3
2,282,261	+		LRK54_RS10355	0.47	+0.9
2,282,261	+		LRK54_RS10355	0.47	+1.2
2,282,261	+		LRK54_RS10355	0.47	+1.4
2,282,261	+		LRK54_RS10355	0.47	+0.8
2,282,262	-		LRK54_RS10355	0.47	+1.0
2,282,262	-		LRK54_RS10355	0.47	+0.2
2,282,262	-		LRK54_RS10355	0.47	+1.3
2,282,262	-		LRK54_RS10355	0.47	+2.0
2,282,852	+				-1.7
2,282,852	+				+0.2
2,282,852	+				+2.0
2,282,852	+				-1.5
2,282,852	+				+1.1
2,282,852	+				-0.4
2,282,853	-				+1.6
2,282,853	-				-0.3
2,282,853	-				+0.4
2,282,853	-				+1.6
2,282,853	-				+1.4
2,282,853	-				-0.2
2,282,853	-				+0.8
2,282,853	-				+0.5
2,282,933	+				+1.5
2,283,218	+		LRK54_RS10360	0.15	-1.1
2,283,218	+		LRK54_RS10360	0.15	-0.5
2,283,218	+		LRK54_RS10360	0.15	+0.4
2,283,218	+		LRK54_RS10360	0.15	-0.1
2,283,219	-		LRK54_RS10360	0.15	-0.0
2,283,219	-		LRK54_RS10360	0.15	+0.1
2,283,219	-		LRK54_RS10360	0.15	-0.0
2,283,219	-		LRK54_RS10360	0.15	+0.3
2,283,444	-		LRK54_RS10360	0.37	-0.6
2,283,444	-		LRK54_RS10360	0.37	-0.6
2,283,647	+		LRK54_RS10360	0.58	-1.4
2,283,647	+		LRK54_RS10360	0.58	+0.9
2,283,648	-		LRK54_RS10360	0.58	-0.7
2,283,648	-		LRK54_RS10360	0.58	+2.2
2,284,177	+				-1.4
2,284,177	+				+0.8
2,284,178	-				-1.1
2,284,260	+		LRK54_RS10365	0.17	-2.7
2,284,261	-		LRK54_RS10365	0.17	+0.3
2,284,261	-		LRK54_RS10365	0.17	-1.0
2,284,261	-		LRK54_RS10365	0.17	-1.4
2,284,261	-		LRK54_RS10365	0.17	+0.3
2,284,261	-		LRK54_RS10365	0.17	-0.7
2,284,532	+		LRK54_RS10365	0.41	-0.9
2,284,532	+		LRK54_RS10365	0.41	-3.1
2,284,532	+		LRK54_RS10365	0.41	+0.4
2,284,533	-		LRK54_RS10365	0.41	-1.7
2,284,533	-		LRK54_RS10365	0.41	+0.7
2,284,534	+		LRK54_RS10365	0.41	-0.2
2,284,534	+		LRK54_RS10365	0.41	-0.7
2,284,534	+		LRK54_RS10365	0.41	-2.2
2,284,534	+		LRK54_RS10365	0.41	-0.0
2,284,534	+		LRK54_RS10365	0.41	+0.6
2,284,534	+		LRK54_RS10365	0.41	+0.8
2,284,535	-		LRK54_RS10365	0.41	-0.3
2,284,535	-		LRK54_RS10365	0.41	+1.3
2,284,715	-		LRK54_RS10365	0.57	-1.0