Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS18545 and HSERO_RS18550 are separated by 55 nucleotides HSERO_RS18550 and HSERO_RS18555 are separated by 7 nucleotides HSERO_RS18555 and HSERO_RS18560 are separated by 130 nucleotides
HSERO_RS18545: HSERO_RS18545 - 3-oxoacyl-ACP synthase, at 4,254,419 to 4,255,663
_RS18545
HSERO_RS18550: HSERO_RS18550 - excinuclease ATPase subunit, at 4,255,719 to 4,256,162
_RS18550
HSERO_RS18555: HSERO_RS18555 - phosphopantetheinyl transferase, at 4,256,170 to 4,256,880
_RS18555
HSERO_RS18560: HSERO_RS18560 - hypothetical protein, at 4,257,011 to 4,257,769
_RS18560
Position (kb) 4255
4256
4257 Strain fitness (log2 ratio) -2
-1
0
1 at 4254.729 kb on - strand, within HSERO_RS18545 at 4254.852 kb on - strand, within HSERO_RS18545 at 4255.008 kb on + strand, within HSERO_RS18545 at 4255.079 kb on + strand, within HSERO_RS18545 at 4255.084 kb on + strand, within HSERO_RS18545 at 4255.087 kb on - strand, within HSERO_RS18545 at 4255.092 kb on - strand, within HSERO_RS18545 at 4255.185 kb on - strand, within HSERO_RS18545 at 4255.352 kb on + strand, within HSERO_RS18545 at 4255.402 kb on + strand, within HSERO_RS18545 at 4255.528 kb on - strand, within HSERO_RS18545 at 4255.673 kb on + strand at 4255.681 kb on - strand at 4255.832 kb on + strand, within HSERO_RS18550 at 4256.174 kb on + strand at 4256.179 kb on + strand at 4256.184 kb on + strand at 4256.212 kb on + strand at 4256.247 kb on + strand, within HSERO_RS18555 at 4256.361 kb on + strand, within HSERO_RS18555 at 4256.369 kb on - strand, within HSERO_RS18555 at 4256.384 kb on + strand, within HSERO_RS18555 at 4256.437 kb on + strand, within HSERO_RS18555 at 4256.483 kb on + strand at 4257.105 kb on - strand, within HSERO_RS18560
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 4,254,729 - HSERO_RS18545 0.25 -1.3 4,254,852 - HSERO_RS18545 0.35 +0.1 4,255,008 + HSERO_RS18545 0.47 -0.2 4,255,079 + HSERO_RS18545 0.53 +0.5 4,255,084 + HSERO_RS18545 0.53 +0.1 4,255,087 - HSERO_RS18545 0.54 +0.1 4,255,092 - HSERO_RS18545 0.54 +0.3 4,255,185 - HSERO_RS18545 0.62 -1.3 4,255,352 + HSERO_RS18545 0.75 +0.7 4,255,402 + HSERO_RS18545 0.79 +0.2 4,255,528 - HSERO_RS18545 0.89 -0.6 4,255,673 + -1.3 4,255,681 - -1.0 4,255,832 + HSERO_RS18550 0.25 -1.1 4,256,174 + -0.9 4,256,179 + +0.1 4,256,184 + +0.9 4,256,212 + +0.2 4,256,247 + HSERO_RS18555 0.11 -0.7 4,256,361 + HSERO_RS18555 0.27 +0.0 4,256,369 - HSERO_RS18555 0.28 +0.6 4,256,384 + HSERO_RS18555 0.30 +0.3 4,256,437 + HSERO_RS18555 0.38 -1.9 4,256,483 + +0.9 4,257,105 - HSERO_RS18560 0.12 +0.4
Or see this region's nucleotide sequence