Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS01085 and HSERO_RS01090 are separated by 35 nucleotides HSERO_RS01090 and HSERO_RS01095 are separated by 240 nucleotides HSERO_RS01095 and HSERO_RS01100 are separated by 553 nucleotides HSERO_RS01100 and HSERO_RS01105 are separated by 40 nucleotides
HSERO_RS01085: HSERO_RS01085 - tail protein, at 229,013 to 230,455
_RS01085
HSERO_RS01090: HSERO_RS01090 - hypothetical protein, at 230,491 to 230,679
_RS01090
HSERO_RS01095: HSERO_RS01095 - hypothetical protein, at 230,920 to 231,252
_RS01095
HSERO_RS01100: HSERO_RS01100 - hypothetical protein, at 231,806 to 231,997
_RS01100
HSERO_RS01105: HSERO_RS01105 - hypothetical protein, at 232,038 to 232,361
_RS01105
Position (kb) 230
231
232 Strain fitness (log2 ratio) -2
-1
0
1
2 at 229.976 kb on + strand at 230.026 kb on + strand, within HSERO_RS01085 at 230.034 kb on - strand, within HSERO_RS01085 at 230.379 kb on + strand at 230.397 kb on - strand at 230.433 kb on - strand at 230.544 kb on + strand, within HSERO_RS01090 at 230.600 kb on - strand, within HSERO_RS01090 at 230.836 kb on + strand at 230.855 kb on - strand at 230.926 kb on - strand at 230.968 kb on + strand, within HSERO_RS01095 at 230.999 kb on + strand, within HSERO_RS01095 at 231.357 kb on - strand at 231.459 kb on - strand at 231.588 kb on + strand at 231.664 kb on - strand at 231.802 kb on + strand at 231.820 kb on - strand at 231.846 kb on + strand, within HSERO_RS01100 at 231.854 kb on - strand, within HSERO_RS01100 at 231.854 kb on - strand, within HSERO_RS01100 at 231.856 kb on + strand, within HSERO_RS01100 at 231.864 kb on - strand, within HSERO_RS01100 at 231.864 kb on - strand, within HSERO_RS01100 at 231.864 kb on - strand, within HSERO_RS01100 at 231.864 kb on - strand, within HSERO_RS01100 at 232.103 kb on - strand, within HSERO_RS01105 at 232.172 kb on + strand, within HSERO_RS01105
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 229,976 + -0.9 230,026 + HSERO_RS01085 0.70 -0.3 230,034 - HSERO_RS01085 0.71 +0.7 230,379 + -0.1 230,397 - +2.1 230,433 - -0.1 230,544 + HSERO_RS01090 0.28 -0.3 230,600 - HSERO_RS01090 0.58 +0.1 230,836 + +0.5 230,855 - -0.3 230,926 - +1.6 230,968 + HSERO_RS01095 0.14 -0.9 230,999 + HSERO_RS01095 0.24 -1.7 231,357 - -0.4 231,459 - -0.0 231,588 + -0.4 231,664 - +0.3 231,802 + -0.0 231,820 - -1.0 231,846 + HSERO_RS01100 0.21 -0.6 231,854 - HSERO_RS01100 0.25 -0.5 231,854 - HSERO_RS01100 0.25 -0.4 231,856 + HSERO_RS01100 0.26 -0.4 231,864 - HSERO_RS01100 0.30 +0.1 231,864 - HSERO_RS01100 0.30 -0.3 231,864 - HSERO_RS01100 0.30 -2.2 231,864 - HSERO_RS01100 0.30 +0.3 232,103 - HSERO_RS01105 0.20 +0.2 232,172 + HSERO_RS01105 0.41 +0.2
Or see this region's nucleotide sequence