Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS00425 and HSERO_RS00430 are separated by 347 nucleotides HSERO_RS00430 and HSERO_RS00435 are separated by 38 nucleotides
HSERO_RS00425: HSERO_RS00425 - ammonia channel protein, at 99,406 to 100,938
_RS00425
HSERO_RS00430: HSERO_RS00430 - glutamate--cysteine ligase, at 101,286 to 102,587
_RS00430
HSERO_RS00435: HSERO_RS00435 - glutathione synthetase, at 102,626 to 103,576
_RS00435
Position (kb) 101
102
103 Strain fitness (log2 ratio) -2
-1
0
1
2 at 100.378 kb on + strand, within HSERO_RS00425 at 100.433 kb on - strand, within HSERO_RS00425 at 100.616 kb on + strand, within HSERO_RS00425 at 100.675 kb on + strand, within HSERO_RS00425 at 100.675 kb on + strand, within HSERO_RS00425 at 100.773 kb on + strand, within HSERO_RS00425 at 100.793 kb on - strand at 100.795 kb on + strand at 100.795 kb on + strand at 100.905 kb on - strand at 100.940 kb on - strand at 100.970 kb on - strand at 101.072 kb on + strand at 101.739 kb on - strand, within HSERO_RS00430 at 101.773 kb on + strand, within HSERO_RS00430 at 102.126 kb on + strand, within HSERO_RS00430 at 102.256 kb on + strand, within HSERO_RS00430 at 102.559 kb on + strand at 102.608 kb on + strand at 102.613 kb on - strand at 102.615 kb on + strand at 102.616 kb on - strand at 102.661 kb on + strand at 102.843 kb on + strand, within HSERO_RS00435 at 102.843 kb on + strand, within HSERO_RS00435 at 103.248 kb on + strand, within HSERO_RS00435 at 103.249 kb on - strand, within HSERO_RS00435 at 103.455 kb on + strand, within HSERO_RS00435 at 103.580 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 100,378 + HSERO_RS00425 0.63 +0.6 100,433 - HSERO_RS00425 0.67 -0.5 100,616 + HSERO_RS00425 0.79 -0.4 100,675 + HSERO_RS00425 0.83 +1.1 100,675 + HSERO_RS00425 0.83 +1.2 100,773 + HSERO_RS00425 0.89 +0.9 100,793 - +0.9 100,795 + +0.8 100,795 + +0.3 100,905 - -0.1 100,940 - +2.2 100,970 - -0.8 101,072 + -0.6 101,739 - HSERO_RS00430 0.35 -2.4 101,773 + HSERO_RS00430 0.37 -2.7 102,126 + HSERO_RS00430 0.65 +0.8 102,256 + HSERO_RS00430 0.75 -1.2 102,559 + -0.1 102,608 + +0.5 102,613 - +0.9 102,615 + -0.7 102,616 - -0.3 102,661 + +0.2 102,843 + HSERO_RS00435 0.23 -1.8 102,843 + HSERO_RS00435 0.23 -0.0 103,248 + HSERO_RS00435 0.65 -0.9 103,249 - HSERO_RS00435 0.66 +0.3 103,455 + HSERO_RS00435 0.87 -0.2 103,580 - -0.7
Or see this region's nucleotide sequence