Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04687 and H281DRAFT_04688 are separated by 345 nucleotides H281DRAFT_04688 and H281DRAFT_04689 are separated by 99 nucleotides
H281DRAFT_04687: H281DRAFT_04687 - 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase, at 92,529 to 93,602
_04687
H281DRAFT_04688: H281DRAFT_04688 - microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62, at 93,948 to 95,414
_04688
H281DRAFT_04689: H281DRAFT_04689 - nitrilase, at 95,514 to 96,410
_04689
Position (kb) 93
94
95
96 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 93.145 kb on + strand, within H281DRAFT_04687 at 93.145 kb on + strand, within H281DRAFT_04687 at 93.145 kb on + strand, within H281DRAFT_04687 at 93.146 kb on - strand, within H281DRAFT_04687 at 93.146 kb on - strand, within H281DRAFT_04687 at 93.169 kb on + strand, within H281DRAFT_04687 at 93.170 kb on - strand, within H281DRAFT_04687 at 93.264 kb on - strand, within H281DRAFT_04687 at 93.278 kb on + strand, within H281DRAFT_04687 at 93.319 kb on + strand, within H281DRAFT_04687 at 93.405 kb on - strand, within H281DRAFT_04687 at 93.490 kb on + strand, within H281DRAFT_04687 at 93.490 kb on + strand, within H281DRAFT_04687 at 93.490 kb on + strand, within H281DRAFT_04687 at 93.491 kb on - strand, within H281DRAFT_04687 at 93.491 kb on - strand, within H281DRAFT_04687 at 93.491 kb on - strand, within H281DRAFT_04687 at 93.491 kb on - strand, within H281DRAFT_04687 at 93.491 kb on - strand, within H281DRAFT_04687 at 93.491 kb on - strand, within H281DRAFT_04687 at 93.625 kb on + strand at 93.626 kb on - strand at 93.626 kb on - strand at 93.659 kb on - strand at 93.659 kb on - strand at 93.730 kb on + strand at 93.731 kb on - strand at 93.731 kb on - strand at 93.739 kb on + strand at 93.740 kb on - strand at 93.740 kb on - strand at 93.846 kb on + strand at 93.847 kb on - strand at 93.950 kb on - strand at 94.084 kb on + strand at 94.085 kb on - strand at 94.085 kb on - strand at 94.136 kb on - strand, within H281DRAFT_04688 at 94.162 kb on + strand, within H281DRAFT_04688 at 94.162 kb on + strand, within H281DRAFT_04688 at 94.235 kb on - strand, within H281DRAFT_04688 at 94.235 kb on - strand, within H281DRAFT_04688 at 94.235 kb on - strand, within H281DRAFT_04688 at 94.294 kb on + strand, within H281DRAFT_04688 at 94.294 kb on + strand, within H281DRAFT_04688 at 94.294 kb on + strand, within H281DRAFT_04688 at 94.295 kb on - strand, within H281DRAFT_04688 at 94.295 kb on - strand, within H281DRAFT_04688 at 94.295 kb on - strand, within H281DRAFT_04688 at 94.295 kb on - strand, within H281DRAFT_04688 at 94.397 kb on + strand, within H281DRAFT_04688 at 94.397 kb on + strand, within H281DRAFT_04688 at 94.398 kb on - strand, within H281DRAFT_04688 at 94.399 kb on + strand, within H281DRAFT_04688 at 94.399 kb on + strand, within H281DRAFT_04688 at 94.400 kb on - strand, within H281DRAFT_04688 at 94.400 kb on - strand, within H281DRAFT_04688 at 94.400 kb on - strand, within H281DRAFT_04688 at 94.744 kb on + strand, within H281DRAFT_04688 at 94.744 kb on + strand, within H281DRAFT_04688 at 94.744 kb on + strand, within H281DRAFT_04688 at 94.745 kb on - strand, within H281DRAFT_04688 at 94.745 kb on - strand, within H281DRAFT_04688 at 94.745 kb on - strand, within H281DRAFT_04688 at 94.845 kb on - strand, within H281DRAFT_04688 at 94.891 kb on + strand, within H281DRAFT_04688 at 94.891 kb on + strand at 94.892 kb on - strand, within H281DRAFT_04688 at 94.892 kb on - strand, within H281DRAFT_04688 at 95.020 kb on + strand, within H281DRAFT_04688 at 95.021 kb on - strand, within H281DRAFT_04688 at 95.021 kb on - strand at 95.275 kb on + strand at 95.275 kb on + strand at 95.275 kb on + strand at 95.350 kb on + strand at 95.351 kb on - strand at 95.421 kb on + strand at 95.421 kb on + strand at 95.422 kb on - strand at 95.422 kb on - strand at 95.422 kb on - strand at 95.422 kb on - strand at 95.422 kb on - strand at 95.465 kb on + strand at 95.465 kb on + strand at 95.465 kb on + strand at 95.474 kb on + strand at 95.474 kb on + strand at 95.474 kb on + strand at 95.474 kb on + strand at 95.474 kb on + strand at 95.474 kb on + strand at 95.474 kb on + strand at 95.475 kb on - strand at 95.475 kb on - strand at 95.475 kb on - strand at 95.475 kb on - strand at 95.475 kb on - strand at 95.475 kb on - strand at 95.475 kb on - strand at 95.476 kb on + strand at 95.476 kb on + strand at 95.476 kb on + strand at 95.515 kb on + strand at 95.516 kb on - strand at 95.516 kb on - strand at 95.516 kb on - strand at 95.516 kb on - strand at 95.516 kb on - strand at 95.567 kb on + strand at 95.666 kb on + strand, within H281DRAFT_04689 at 95.666 kb on + strand, within H281DRAFT_04689 at 95.713 kb on + strand, within H281DRAFT_04689 at 95.713 kb on + strand, within H281DRAFT_04689 at 95.713 kb on + strand, within H281DRAFT_04689 at 95.713 kb on + strand, within H281DRAFT_04689 at 95.713 kb on + strand, within H281DRAFT_04689 at 95.713 kb on + strand at 95.713 kb on + strand, within H281DRAFT_04689 at 95.713 kb on + strand, within H281DRAFT_04689 at 95.713 kb on + strand at 95.714 kb on - strand, within H281DRAFT_04689 at 95.714 kb on - strand, within H281DRAFT_04689 at 95.714 kb on - strand, within H281DRAFT_04689 at 95.714 kb on - strand, within H281DRAFT_04689 at 95.714 kb on - strand, within H281DRAFT_04689 at 95.776 kb on + strand, within H281DRAFT_04689 at 95.777 kb on - strand, within H281DRAFT_04689 at 95.777 kb on - strand, within H281DRAFT_04689 at 95.780 kb on + strand, within H281DRAFT_04689 at 95.980 kb on + strand, within H281DRAFT_04689 at 96.012 kb on + strand, within H281DRAFT_04689 at 96.013 kb on - strand, within H281DRAFT_04689
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 93,145 + H281DRAFT_04687 0.57 -2.3 93,145 + H281DRAFT_04687 0.57 -3.5 93,145 + H281DRAFT_04687 0.57 -2.2 93,146 - H281DRAFT_04687 0.57 -1.0 93,146 - H281DRAFT_04687 0.57 -1.3 93,169 + H281DRAFT_04687 0.60 -2.3 93,170 - H281DRAFT_04687 0.60 +0.0 93,264 - H281DRAFT_04687 0.68 -0.6 93,278 + H281DRAFT_04687 0.70 -0.2 93,319 + H281DRAFT_04687 0.74 -2.6 93,405 - H281DRAFT_04687 0.82 -2.4 93,490 + H281DRAFT_04687 0.89 -1.8 93,490 + H281DRAFT_04687 0.89 -1.5 93,490 + H281DRAFT_04687 0.89 -1.8 93,491 - H281DRAFT_04687 0.90 -3.6 93,491 - H281DRAFT_04687 0.90 -1.6 93,491 - H281DRAFT_04687 0.90 -1.7 93,491 - H281DRAFT_04687 0.90 -3.1 93,491 - H281DRAFT_04687 0.90 -2.0 93,491 - H281DRAFT_04687 0.90 -2.6 93,625 + -0.8 93,626 - -0.3 93,626 - -0.6 93,659 - +0.6 93,659 - +0.2 93,730 + -0.9 93,731 - +0.7 93,731 - -0.9 93,739 + -3.4 93,740 - -0.6 93,740 - -0.5 93,846 + -0.4 93,847 - -0.2 93,950 - +0.7 94,084 + +0.6 94,085 - +0.1 94,085 - +1.5 94,136 - H281DRAFT_04688 0.13 +0.4 94,162 + H281DRAFT_04688 0.15 +0.8 94,162 + H281DRAFT_04688 0.15 +0.4 94,235 - H281DRAFT_04688 0.20 -0.4 94,235 - H281DRAFT_04688 0.20 -0.3 94,235 - H281DRAFT_04688 0.20 +0.0 94,294 + H281DRAFT_04688 0.24 +0.5 94,294 + H281DRAFT_04688 0.24 -0.4 94,294 + H281DRAFT_04688 0.24 -0.5 94,295 - H281DRAFT_04688 0.24 +0.2 94,295 - H281DRAFT_04688 0.24 +0.8 94,295 - H281DRAFT_04688 0.24 +0.5 94,295 - H281DRAFT_04688 0.24 +0.1 94,397 + H281DRAFT_04688 0.31 +0.2 94,397 + H281DRAFT_04688 0.31 +0.7 94,398 - H281DRAFT_04688 0.31 +0.0 94,399 + H281DRAFT_04688 0.31 -0.3 94,399 + H281DRAFT_04688 0.31 +0.0 94,400 - H281DRAFT_04688 0.31 +0.8 94,400 - H281DRAFT_04688 0.31 -0.6 94,400 - H281DRAFT_04688 0.31 +0.5 94,744 + H281DRAFT_04688 0.54 +0.8 94,744 + H281DRAFT_04688 0.54 -0.1 94,744 + H281DRAFT_04688 0.54 +0.2 94,745 - H281DRAFT_04688 0.54 -0.3 94,745 - H281DRAFT_04688 0.54 -0.4 94,745 - H281DRAFT_04688 0.54 +1.0 94,845 - H281DRAFT_04688 0.61 +1.1 94,891 + H281DRAFT_04688 0.64 -0.3 94,891 + +1.6 94,892 - H281DRAFT_04688 0.64 -1.1 94,892 - H281DRAFT_04688 0.64 +0.2 95,020 + H281DRAFT_04688 0.73 -0.2 95,021 - H281DRAFT_04688 0.73 -0.9 95,021 - +3.2 95,275 + -2.4 95,275 + -0.1 95,275 + -0.2 95,350 + -0.0 95,351 - -0.1 95,421 + -0.1 95,421 + +0.4 95,422 - +0.7 95,422 - +0.3 95,422 - +0.7 95,422 - -0.1 95,422 - +2.8 95,465 + +0.5 95,465 + +0.4 95,465 + -0.2 95,474 + -0.2 95,474 + +0.5 95,474 + -1.1 95,474 + -0.7 95,474 + +0.9 95,474 + -0.9 95,474 + -0.0 95,475 - +2.5 95,475 - +0.0 95,475 - +2.8 95,475 - +0.3 95,475 - -0.5 95,475 - +0.0 95,475 - -0.3 95,476 + +0.1 95,476 + -0.5 95,476 + -0.7 95,515 + +0.6 95,516 - +0.0 95,516 - +0.0 95,516 - -0.5 95,516 - -1.2 95,516 - +0.6 95,567 + +0.0 95,666 + H281DRAFT_04689 0.17 +0.8 95,666 + H281DRAFT_04689 0.17 +0.9 95,713 + H281DRAFT_04689 0.22 +0.7 95,713 + H281DRAFT_04689 0.22 +0.1 95,713 + H281DRAFT_04689 0.22 -0.1 95,713 + H281DRAFT_04689 0.22 +0.7 95,713 + H281DRAFT_04689 0.22 -0.7 95,713 + +0.9 95,713 + H281DRAFT_04689 0.22 -0.1 95,713 + H281DRAFT_04689 0.22 -0.6 95,713 + +1.2 95,714 - H281DRAFT_04689 0.22 +0.6 95,714 - H281DRAFT_04689 0.22 -1.6 95,714 - H281DRAFT_04689 0.22 +0.3 95,714 - H281DRAFT_04689 0.22 +0.5 95,714 - H281DRAFT_04689 0.22 +0.6 95,776 + H281DRAFT_04689 0.29 -1.3 95,777 - H281DRAFT_04689 0.29 +0.2 95,777 - H281DRAFT_04689 0.29 -0.2 95,780 + H281DRAFT_04689 0.30 -0.6 95,980 + H281DRAFT_04689 0.52 +0.1 96,012 + H281DRAFT_04689 0.56 -0.1 96,013 - H281DRAFT_04689 0.56 -0.3
Or see this region's nucleotide sequence