Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03344

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03343 and H281DRAFT_03344 are separated by 61 nucleotidesH281DRAFT_03344 and H281DRAFT_03345 are separated by 485 nucleotides H281DRAFT_03343: H281DRAFT_03343 - Membrane-bound lytic murein transglycosylase MltF, at 401,545 to 403,167 _03343 H281DRAFT_03344: H281DRAFT_03344 - Predicted ester cyclase, at 403,229 to 403,807 _03344 H281DRAFT_03345: H281DRAFT_03345 - NHL repeat-containing protein, at 404,293 to 405,504 _03345 Position (kb) 403 404Strain fitness (log2 ratio) -1 0 1at 402.248 kb on - strand, within H281DRAFT_03343at 402.248 kb on - strand, within H281DRAFT_03343at 402.581 kb on - strand, within H281DRAFT_03343at 402.581 kb on - strand, within H281DRAFT_03343at 402.582 kb on + strand, within H281DRAFT_03343at 402.582 kb on + strand, within H281DRAFT_03343at 402.583 kb on - strand, within H281DRAFT_03343at 402.583 kb on - strand, within H281DRAFT_03343at 402.583 kb on - strand, within H281DRAFT_03343at 402.606 kb on + strand, within H281DRAFT_03343at 402.668 kb on - strand, within H281DRAFT_03343at 402.795 kb on + strand, within H281DRAFT_03343at 402.856 kb on + strand, within H281DRAFT_03343at 403.066 kb on + strandat 403.082 kb on - strandat 403.230 kb on + strandat 403.317 kb on + strand, within H281DRAFT_03344at 403.400 kb on + strand, within H281DRAFT_03344at 403.600 kb on + strand, within H281DRAFT_03344at 403.606 kb on - strand, within H281DRAFT_03344at 403.913 kb on + strandat 403.914 kb on - strandat 404.120 kb on + strandat 404.663 kb on + strand, within H281DRAFT_03345at 404.664 kb on - strand, within H281DRAFT_03345at 404.666 kb on - strand, within H281DRAFT_03345

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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402,248 - H281DRAFT_03343 0.43 +0.0
402,248 - H281DRAFT_03343 0.43 +0.2
402,581 - H281DRAFT_03343 0.64 -0.2
402,581 - H281DRAFT_03343 0.64 -0.7
402,582 + H281DRAFT_03343 0.64 +0.2
402,582 + H281DRAFT_03343 0.64 +0.8
402,583 - H281DRAFT_03343 0.64 -0.8
402,583 - H281DRAFT_03343 0.64 +0.6
402,583 - H281DRAFT_03343 0.64 -0.7
402,606 + H281DRAFT_03343 0.65 -0.1
402,668 - H281DRAFT_03343 0.69 -0.6
402,795 + H281DRAFT_03343 0.77 -0.9
402,856 + H281DRAFT_03343 0.81 -1.0
403,066 + +0.8
403,082 - -0.4
403,230 + -0.3
403,317 + H281DRAFT_03344 0.15 +1.5
403,400 + H281DRAFT_03344 0.30 -0.5
403,600 + H281DRAFT_03344 0.64 -0.0
403,606 - H281DRAFT_03344 0.65 +0.4
403,913 + +0.3
403,914 - +0.2
404,120 + -0.6
404,663 + H281DRAFT_03345 0.31 -1.1
404,664 - H281DRAFT_03345 0.31 -0.4
404,666 - H281DRAFT_03345 0.31 +0.0

Or see this region's nucleotide sequence