Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00934 and H281DRAFT_00935 are separated by 212 nucleotides H281DRAFT_00935 and H281DRAFT_00936 are separated by 31 nucleotides
H281DRAFT_00934: H281DRAFT_00934 - Small-conductance mechanosensitive channel, at 1,036,913 to 1,038,148
_00934
H281DRAFT_00935: H281DRAFT_00935 - trehalose 6-phosphate synthase, at 1,038,361 to 1,039,773
_00935
H281DRAFT_00936: H281DRAFT_00936 - Predicted ATPase, at 1,039,805 to 1,041,037
_00936
Position (kb)
1038
1039
1040 Strain fitness (log2 ratio)
-2
-1
0
1 at 1037.600 kb on + strand, within H281DRAFT_00934 at 1037.600 kb on + strand, within H281DRAFT_00934 at 1037.600 kb on + strand, within H281DRAFT_00934 at 1037.601 kb on - strand, within H281DRAFT_00934 at 1037.601 kb on - strand, within H281DRAFT_00934 at 1037.952 kb on - strand, within H281DRAFT_00934 at 1038.146 kb on + strand at 1038.241 kb on + strand at 1038.241 kb on + strand at 1038.241 kb on + strand at 1038.241 kb on + strand at 1038.241 kb on + strand at 1038.241 kb on + strand at 1038.242 kb on - strand at 1038.242 kb on - strand at 1038.242 kb on - strand at 1038.247 kb on + strand at 1038.247 kb on + strand at 1038.248 kb on - strand at 1038.248 kb on - strand at 1038.355 kb on - strand at 1038.355 kb on - strand at 1038.355 kb on - strand at 1038.595 kb on - strand at 1038.596 kb on - strand, within H281DRAFT_00935 at 1038.599 kb on - strand, within H281DRAFT_00935 at 1038.677 kb on - strand, within H281DRAFT_00935 at 1038.763 kb on + strand, within H281DRAFT_00935 at 1038.764 kb on - strand, within H281DRAFT_00935 at 1038.958 kb on + strand, within H281DRAFT_00935 at 1038.958 kb on + strand, within H281DRAFT_00935 at 1038.959 kb on - strand, within H281DRAFT_00935 at 1038.959 kb on - strand, within H281DRAFT_00935 at 1039.288 kb on - strand, within H281DRAFT_00935 at 1039.288 kb on - strand, within H281DRAFT_00935 at 1039.291 kb on + strand, within H281DRAFT_00935 at 1039.345 kb on + strand, within H281DRAFT_00935 at 1039.346 kb on - strand, within H281DRAFT_00935 at 1039.346 kb on - strand, within H281DRAFT_00935 at 1039.360 kb on + strand, within H281DRAFT_00935 at 1039.390 kb on + strand, within H281DRAFT_00935 at 1039.390 kb on + strand, within H281DRAFT_00935 at 1039.484 kb on - strand, within H281DRAFT_00935 at 1039.771 kb on + strand at 1039.858 kb on - strand at 1040.190 kb on - strand, within H281DRAFT_00936 at 1040.468 kb on + strand, within H281DRAFT_00936 at 1040.468 kb on + strand, within H281DRAFT_00936 at 1040.469 kb on - strand, within H281DRAFT_00936 at 1040.469 kb on - strand, within H281DRAFT_00936 at 1040.747 kb on + strand, within H281DRAFT_00936 at 1040.748 kb on - strand, within H281DRAFT_00936 at 1040.748 kb on - strand, within H281DRAFT_00936 at 1040.751 kb on + strand, within H281DRAFT_00936 at 1040.752 kb on - strand, within H281DRAFT_00936 at 1040.752 kb on - strand, within H281DRAFT_00936 at 1040.752 kb on - strand, within H281DRAFT_00936 at 1040.752 kb on - strand, within H281DRAFT_00936 at 1040.752 kb on - strand, within H281DRAFT_00936
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,037,600 + H281DRAFT_00934 0.56 +0.7 1,037,600 + H281DRAFT_00934 0.56 -0.2 1,037,600 + H281DRAFT_00934 0.56 -0.4 1,037,601 - H281DRAFT_00934 0.56 +0.9 1,037,601 - H281DRAFT_00934 0.56 -0.8 1,037,952 - H281DRAFT_00934 0.84 -0.6 1,038,146 + +0.1 1,038,241 + -0.2 1,038,241 + +0.2 1,038,241 + -0.2 1,038,241 + -2.1 1,038,241 + +0.4 1,038,241 + +0.7 1,038,242 - +0.1 1,038,242 - -0.2 1,038,242 - +0.5 1,038,247 + +0.6 1,038,247 + +1.0 1,038,248 - +0.3 1,038,248 - +0.6 1,038,355 - -0.8 1,038,355 - +0.2 1,038,355 - +0.3 1,038,595 - +1.3 1,038,596 - H281DRAFT_00935 0.17 +0.8 1,038,599 - H281DRAFT_00935 0.17 -0.5 1,038,677 - H281DRAFT_00935 0.22 +0.3 1,038,763 + H281DRAFT_00935 0.28 +0.2 1,038,764 - H281DRAFT_00935 0.29 +0.2 1,038,958 + H281DRAFT_00935 0.42 +0.0 1,038,958 + H281DRAFT_00935 0.42 +0.2 1,038,959 - H281DRAFT_00935 0.42 -0.1 1,038,959 - H281DRAFT_00935 0.42 +0.2 1,039,288 - H281DRAFT_00935 0.66 +0.7 1,039,288 - H281DRAFT_00935 0.66 -0.2 1,039,291 + H281DRAFT_00935 0.66 -0.4 1,039,345 + H281DRAFT_00935 0.70 -0.1 1,039,346 - H281DRAFT_00935 0.70 +0.7 1,039,346 - H281DRAFT_00935 0.70 -0.1 1,039,360 + H281DRAFT_00935 0.71 +0.1 1,039,390 + H281DRAFT_00935 0.73 +0.6 1,039,390 + H281DRAFT_00935 0.73 -1.5 1,039,484 - H281DRAFT_00935 0.79 +0.0 1,039,771 + -0.3 1,039,858 - -0.6 1,040,190 - H281DRAFT_00936 0.31 +0.4 1,040,468 + H281DRAFT_00936 0.54 -0.6 1,040,468 + H281DRAFT_00936 0.54 +0.3 1,040,469 - H281DRAFT_00936 0.54 -0.3 1,040,469 - H281DRAFT_00936 0.54 -0.3 1,040,747 + H281DRAFT_00936 0.76 +0.4 1,040,748 - H281DRAFT_00936 0.76 +0.9 1,040,748 - H281DRAFT_00936 0.76 -0.6 1,040,751 + H281DRAFT_00936 0.77 +0.5 1,040,752 - H281DRAFT_00936 0.77 +0.4 1,040,752 - H281DRAFT_00936 0.77 -0.7 1,040,752 - H281DRAFT_00936 0.77 +0.4 1,040,752 - H281DRAFT_00936 0.77 -2.3 1,040,752 - H281DRAFT_00936 0.77 -1.0
Or see this region's nucleotide sequence