Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3222

Experiment: 1-ethyl-3-methylimidazolium acetate 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 10 mM
3,352,761	+				-0.4
3,352,777	+				+1.3
3,352,778	-				+0.5
3,352,778	-				-0.8
3,352,778	-				+0.2
3,352,778	-				-0.4
3,352,778	-				-0.8
3,352,778	-				+0.6
3,352,778	-				-0.5
3,352,778	-				+0.4
3,352,801	+				+0.2
3,352,802	-				-0.2
3,352,802	-				-0.4
3,352,856	+				-1.0
3,352,856	+				+1.1
3,352,856	+				-0.0
3,352,856	+				-0.5
3,352,856	+				+0.3
3,352,856	+				-0.2
3,352,856	+				+0.3
3,352,857	-				+0.1
3,352,857	-				-1.1
3,352,857	-				+1.0
3,352,857	-				+0.2
3,352,955	+		Ga0059261_3221	0.20	-0.6
3,352,955	+		Ga0059261_3221	0.20	+1.0
3,352,956	-		Ga0059261_3221	0.20	-0.9
3,352,956	-		Ga0059261_3221	0.20	-0.1
3,352,991	+		Ga0059261_3221	0.25	-0.4
3,352,991	+		Ga0059261_3221	0.25	-0.6
3,352,992	-		Ga0059261_3221	0.25	-0.4
3,352,992	-		Ga0059261_3221	0.25	-0.6
3,352,992	-		Ga0059261_3221	0.25	-0.2
3,352,992	-		Ga0059261_3221	0.25	-0.2
3,353,060	+		Ga0059261_3221	0.33	-0.9
3,353,062	+		Ga0059261_3221	0.33	-1.0
3,353,062	+		Ga0059261_3221	0.33	-0.8
3,353,063	-		Ga0059261_3221	0.33	-0.1
3,353,063	-		Ga0059261_3221	0.33	-0.3
3,353,177	+		Ga0059261_3221	0.46	-0.9
3,353,178	-		Ga0059261_3221	0.46	+1.0
3,353,270	+		Ga0059261_3221	0.57	-0.6
3,353,270	+		Ga0059261_3221	0.57	-0.7
3,353,270	+		Ga0059261_3221	0.57	-0.4
3,353,270	+		Ga0059261_3221	0.57	+0.2
3,353,270	+		Ga0059261_3221	0.57	-0.7
3,353,270	+		Ga0059261_3221	0.57	-0.0
3,353,270	+		Ga0059261_3221	0.57	-0.4
3,353,270	+		Ga0059261_3221	0.57	+0.5
3,353,270	+		Ga0059261_3221	0.57	-0.0
3,353,270	+		Ga0059261_3221	0.57	+0.5
3,353,270	+		Ga0059261_3221	0.57	+0.2
3,353,270	+		Ga0059261_3221	0.57	-0.1
3,353,270	+		Ga0059261_3221	0.57	-0.4
3,353,270	+		Ga0059261_3221	0.57	-0.7
3,353,270	+		Ga0059261_3221	0.57	-0.7
3,353,270	+		Ga0059261_3221	0.57	-0.3
3,353,270	+		Ga0059261_3221	0.57	-0.6
3,353,270	+		Ga0059261_3221	0.57	-0.3
3,353,271	-		Ga0059261_3221	0.57	-0.3
3,353,271	-		Ga0059261_3221	0.57	+0.2
3,353,271	-		Ga0059261_3221	0.57	+0.4
3,353,271	-		Ga0059261_3221	0.57	+0.8
3,353,271	-		Ga0059261_3221	0.57	+0.7
3,353,271	-		Ga0059261_3221	0.57	-0.9
3,353,271	-		Ga0059261_3221	0.57	+0.3
3,353,271	-		Ga0059261_3221	0.57	+0.2
3,353,271	-		Ga0059261_3221	0.57	-0.0
3,353,271	-		Ga0059261_3221	0.57	-0.3
3,353,271	-		Ga0059261_3221	0.57	-0.3
3,353,271	-		Ga0059261_3221	0.57	+0.2
3,353,272	+		Ga0059261_3221	0.57	-0.0
3,353,272	+		Ga0059261_3221	0.57	-0.3
3,353,272	+		Ga0059261_3221	0.57	-0.4
3,353,272	+		Ga0059261_3221	0.57	+0.3
3,353,272	+		Ga0059261_3221	0.57	+0.3
3,353,272	+		Ga0059261_3221	0.57	+0.3
3,353,272	+		Ga0059261_3221	0.57	+1.2
3,353,272	+		Ga0059261_3221	0.57	+0.3
3,353,272	+		Ga0059261_3221	0.57	+1.6
3,353,273	-		Ga0059261_3221	0.58	+0.8
3,353,273	-		Ga0059261_3221	0.58	+0.2
3,353,273	-		Ga0059261_3221	0.58	-0.8
3,353,273	-		Ga0059261_3221	0.58	-2.1
3,353,273	-		Ga0059261_3221	0.58	+1.6
3,353,273	-		Ga0059261_3221	0.58	-1.0
3,353,274	+		Ga0059261_3221	0.58	+0.2
3,353,276	+		Ga0059261_3221	0.58	-0.6
3,353,276	+		Ga0059261_3221	0.58	-0.1
3,353,276	+				-0.0
3,353,276	+		Ga0059261_3221	0.58	+0.2
3,353,276	+		Ga0059261_3221	0.58	-1.4
3,353,277	-		Ga0059261_3221	0.58	-2.0
3,353,277	-		Ga0059261_3221	0.58	+0.2
3,353,313	-		Ga0059261_3221	0.62	+1.1
3,353,390	+		Ga0059261_3221	0.71	-0.9
3,353,390	+		Ga0059261_3221	0.71	-0.2
3,353,390	+		Ga0059261_3221	0.71	-0.4
3,353,391	-		Ga0059261_3221	0.71	-0.6
3,353,391	-		Ga0059261_3221	0.71	-0.0
3,353,447	+		Ga0059261_3221	0.78	+0.5
3,353,448	-		Ga0059261_3221	0.78	-0.3
3,353,480	+		Ga0059261_3221	0.82	-1.1
3,353,480	+		Ga0059261_3221	0.82	-0.3
3,353,480	+		Ga0059261_3221	0.82	-0.4
3,353,480	+		Ga0059261_3221	0.82	-0.1
3,353,480	+		Ga0059261_3221	0.82	-0.4
3,353,480	+		Ga0059261_3221	0.82	-0.9
3,353,481	-		Ga0059261_3221	0.82	+0.4
3,353,481	-		Ga0059261_3221	0.82	+0.4
3,353,594	+				-0.2
3,353,594	+				-0.6
3,353,595	-				+0.2
3,353,595	-				-0.4
3,353,703	+				-0.9
3,353,704	-				+1.0
3,353,973	+		Ga0059261_3222	0.49	+0.8
3,353,974	-		Ga0059261_3222	0.49	+0.7
3,353,974	-		Ga0059261_3222	0.49	-0.2
3,353,989	+		Ga0059261_3222	0.52	+0.5
3,353,989	+		Ga0059261_3222	0.52	-1.0
3,353,989	+		Ga0059261_3222	0.52	-0.2
3,353,989	+		Ga0059261_3222	0.52	-0.6
3,353,990	-		Ga0059261_3222	0.52	+0.5
3,353,990	-		Ga0059261_3222	0.52	+0.7
3,354,001	+		Ga0059261_3222	0.54	+1.1
3,354,001	+		Ga0059261_3222	0.54	+0.2
3,354,002	-		Ga0059261_3222	0.55	-0.0
3,354,002	-		Ga0059261_3222	0.55	-0.4
3,354,002	-		Ga0059261_3222	0.55	+0.1
3,354,241	+				-0.0
3,354,282	-				+0.4
3,354,320	+				-0.2
3,354,320	+				+0.5
3,354,320	+				+0.5
3,354,320	+				-0.2
3,354,320	+				-0.8
3,354,320	+				+0.3
3,354,329	+				+0.4
3,354,396	+		Ga0059261_3223	0.15	-0.4
3,354,418	-		Ga0059261_3223	0.19	-0.1
3,354,432	+		Ga0059261_3223	0.22	-0.6
3,354,433	-		Ga0059261_3223	0.22	-0.4
3,354,433	-		Ga0059261_3223	0.22	+0.2
3,354,433	-		Ga0059261_3223	0.22	+0.4
3,354,435	+		Ga0059261_3223	0.22	+0.1
3,354,435	+		Ga0059261_3223	0.22	-0.1
3,354,435	+		Ga0059261_3223	0.22	-2.6
3,354,435	+		Ga0059261_3223	0.22	+0.1
3,354,436	-		Ga0059261_3223	0.23	+1.0
3,354,436	-		Ga0059261_3223	0.23	-1.3
3,354,436	-		Ga0059261_3223	0.23	-0.1
3,354,436	-		Ga0059261_3223	0.23	-0.1
3,354,447	+		Ga0059261_3223	0.25	+0.9
3,354,448	-		Ga0059261_3223	0.25	+0.3
3,354,450	+		Ga0059261_3223	0.25	-0.3
3,354,450	+		Ga0059261_3223	0.25	-0.6
3,354,450	+		Ga0059261_3223	0.25	-0.3
3,354,450	+		Ga0059261_3223	0.25	-0.7
3,354,450	+		Ga0059261_3223	0.25	+0.5
3,354,450	+		Ga0059261_3223	0.25	-1.8
3,354,451	-		Ga0059261_3223	0.25	+1.7
3,354,451	-		Ga0059261_3223	0.25	-0.1
3,354,451	-		Ga0059261_3223	0.25	-0.5
3,354,451	-		Ga0059261_3223	0.25	-1.1
3,354,468	+		Ga0059261_3223	0.29	+0.3
3,354,468	+		Ga0059261_3223	0.29	-0.1
3,354,468	+		Ga0059261_3223	0.29	-0.2
3,354,469	-		Ga0059261_3223	0.29	+0.6
3,354,469	-		Ga0059261_3223	0.29	-0.4
3,354,469	-				-0.6
3,354,492	+		Ga0059261_3223	0.33	+0.2
3,354,492	+		Ga0059261_3223	0.33	-0.8
3,354,501	+		Ga0059261_3223	0.35	+0.1
3,354,501	+		Ga0059261_3223	0.35	-1.3
3,354,501	+		Ga0059261_3223	0.35	+0.7
3,354,501	+		Ga0059261_3223	0.35	-0.4
3,354,502	-		Ga0059261_3223	0.35	+0.4
3,354,502	-		Ga0059261_3223	0.35	-1.6
3,354,502	-		Ga0059261_3223	0.35	-1.7
3,354,502	-		Ga0059261_3223	0.35	-1.0
3,354,502	-		Ga0059261_3223	0.35	+1.2
3,354,504	+		Ga0059261_3223	0.35	+1.8
3,354,504	+		Ga0059261_3223	0.35	-0.0
3,354,504	+		Ga0059261_3223	0.35	-0.7
3,354,504	+		Ga0059261_3223	0.35	-0.2
3,354,504	+		Ga0059261_3223	0.35	+0.2
3,354,504	+		Ga0059261_3223	0.35	+0.4
3,354,504	+		Ga0059261_3223	0.35	+0.1
3,354,504	+		Ga0059261_3223	0.35	-0.1
3,354,504	+		Ga0059261_3223	0.35	-2.3
3,354,504	-		Ga0059261_3223	0.35	-0.4
3,354,505	-		Ga0059261_3223	0.36	+0.3
3,354,505	-		Ga0059261_3223	0.36	-0.1
3,354,505	-		Ga0059261_3223	0.36	-0.0
3,354,505	-		Ga0059261_3223	0.36	-0.7
3,354,505	-		Ga0059261_3223	0.36	+0.4
3,354,505	-		Ga0059261_3223	0.36	-0.1
3,354,505	-		Ga0059261_3223	0.36	-0.2
3,354,505	-		Ga0059261_3223	0.36	-1.6
3,354,508	-		Ga0059261_3223	0.36	-0.2
3,354,522	+		Ga0059261_3223	0.39	+0.6
3,354,523	-		Ga0059261_3223	0.39	+0.6
3,354,525	+		Ga0059261_3223	0.39	+0.5
3,354,525	+		Ga0059261_3223	0.39	-0.6
3,354,525	+		Ga0059261_3223	0.39	+0.5
3,354,525	+		Ga0059261_3223	0.39	-0.5
3,354,525	+		Ga0059261_3223	0.39	+1.0
3,354,525	+		Ga0059261_3223	0.39	+0.1
3,354,525	+		Ga0059261_3223	0.39	-0.4
3,354,525	+		Ga0059261_3223	0.39	+0.1
3,354,525	+		Ga0059261_3223	0.39	+0.1
3,354,525	+		Ga0059261_3223	0.39	-1.1
3,354,526	-		Ga0059261_3223	0.40	+0.3
3,354,526	-		Ga0059261_3223	0.40	+0.4
3,354,526	-		Ga0059261_3223	0.40	-0.1
3,354,526	-		Ga0059261_3223	0.40	+0.2
3,354,526	-		Ga0059261_3223	0.40	+0.1
3,354,526	-		Ga0059261_3223	0.40	-0.4
3,354,526	-		Ga0059261_3223	0.40	-0.6
3,354,526	-		Ga0059261_3223	0.40	-0.7
3,354,526	-		Ga0059261_3223	0.40	-0.2
3,354,526	-		Ga0059261_3223	0.40	-1.4
3,354,526	-		Ga0059261_3223	0.40	-0.1
3,354,526	-		Ga0059261_3223	0.40	-0.7
3,354,526	-		Ga0059261_3223	0.40	+0.9
3,354,526	-		Ga0059261_3223	0.40	-0.5
3,354,526	-		Ga0059261_3223	0.40	-0.0
3,354,526	-		Ga0059261_3223	0.40	-1.4
3,354,526	-		Ga0059261_3223	0.40	-1.0
3,354,526	-		Ga0059261_3223	0.40	+0.6
3,354,526	-		Ga0059261_3223	0.40	-0.6
3,354,526	-		Ga0059261_3223	0.40	+0.1
3,354,531	+		Ga0059261_3223	0.40	-0.1
3,354,531	+		Ga0059261_3223	0.40	+0.4
3,354,531	+		Ga0059261_3223	0.40	-0.0
3,354,531	+		Ga0059261_3223	0.40	+0.3
3,354,532	-		Ga0059261_3223	0.41	-0.6
3,354,532	-		Ga0059261_3223	0.41	-0.5
3,354,532	-		Ga0059261_3223	0.41	+0.4
3,354,532	-		Ga0059261_3223	0.41	-0.2
3,354,532	-		Ga0059261_3223	0.41	-0.1
3,354,532	-		Ga0059261_3223	0.41	+0.1
3,354,711	+				+0.4
3,354,712	-		Ga0059261_3223	0.74	-0.3
3,354,786	+		Ga0059261_3223	0.88	-0.1
3,354,787	-		Ga0059261_3223	0.88	+0.4
3,354,847	-				-0.1
3,354,847	-				+0.0
3,354,912	+		Ga0059261_3224	0.15	-0.6
3,354,912	+		Ga0059261_3224	0.15	+0.5
3,354,913	-		Ga0059261_3224	0.15	-0.6
3,354,913	-		Ga0059261_3224	0.15	+0.4
3,354,913	-		Ga0059261_3224	0.15	-2.0
3,354,913	-		Ga0059261_3224	0.15	-1.8
3,354,935	-		Ga0059261_3224	0.20	+0.3
3,355,081	+		Ga0059261_3224	0.53	-0.1
3,355,081	+		Ga0059261_3224	0.53	+0.4
3,355,081	+		Ga0059261_3224	0.53	+0.7
3,355,081	+		Ga0059261_3224	0.53	-0.8
3,355,081	+		Ga0059261_3224	0.53	-0.5
3,355,081	+		Ga0059261_3224	0.53	+0.5
3,355,082	-		Ga0059261_3224	0.53	+0.5
3,355,082	-		Ga0059261_3224	0.53	-0.3
3,355,082	-		Ga0059261_3224	0.53	-1.6
3,355,082	-		Ga0059261_3224	0.53	-0.4
3,355,082	-		Ga0059261_3224	0.53	-0.6
3,355,197	+		Ga0059261_3224	0.79	+0.4
3,355,197	+		Ga0059261_3224	0.79	-0.1
3,355,197	+		Ga0059261_3224	0.79	-1.5
3,355,198	-		Ga0059261_3224	0.79	+0.2
3,355,198	-		Ga0059261_3224	0.79	-0.5
3,355,198	-		Ga0059261_3224	0.79	-0.2
3,355,198	-		Ga0059261_3224	0.79	+1.0
3,355,198	-		Ga0059261_3224	0.79	+0.9
3,355,198	-		Ga0059261_3224	0.79	-0.2
3,355,239	+		Ga0059261_3224	0.88	+0.3
3,355,240	-		Ga0059261_3224	0.88	+0.3
3,355,240	-		Ga0059261_3224	0.88	-0.4
3,355,240	-		Ga0059261_3224	0.88	+0.2
3,355,240	-		Ga0059261_3224	0.88	+0.5