Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1708

Experiment: 1-ethyl-3-methylimidazolium acetate 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 10 mM
1,818,337	+		Ga0059261_1706	0.45	-1.3
1,818,337	+		Ga0059261_1706	0.45	-0.3
1,818,337	+		Ga0059261_1706	0.45	+0.5
1,818,337	+		Ga0059261_1706	0.45	+0.0
1,818,337	+		Ga0059261_1706	0.45	+0.6
1,818,337	+		Ga0059261_1706	0.45	+0.2
1,818,337	+		Ga0059261_1706	0.45	+0.1
1,818,337	+		Ga0059261_1706	0.45	+0.4
1,818,338	-		Ga0059261_1706	0.45	-0.1
1,818,338	-		Ga0059261_1706	0.45	-0.0
1,818,338	-		Ga0059261_1706	0.45	+0.3
1,818,338	-		Ga0059261_1706	0.45	-0.7
1,818,338	-		Ga0059261_1706	0.45	-0.1
1,818,338	-		Ga0059261_1706	0.45	+0.4
1,818,338	-		Ga0059261_1706	0.45	-0.3
1,818,343	+		Ga0059261_1706	0.46	-0.2
1,818,343	+		Ga0059261_1706	0.46	-0.2
1,818,343	+		Ga0059261_1706	0.46	-0.3
1,818,344	-		Ga0059261_1706	0.46	-0.5
1,818,344	-		Ga0059261_1706	0.46	-0.1
1,818,344	-		Ga0059261_1706	0.46	-0.9
1,818,344	-		Ga0059261_1706	0.46	+0.1
1,818,344	-		Ga0059261_1706	0.46	+0.6
1,818,349	+		Ga0059261_1706	0.47	+0.4
1,818,349	+		Ga0059261_1706	0.47	+0.1
1,818,349	+		Ga0059261_1706	0.47	-0.3
1,818,350	-		Ga0059261_1706	0.47	-0.2
1,818,502	+		Ga0059261_1706	0.70	+0.1
1,818,502	+		Ga0059261_1706	0.70	-0.1
1,818,502	+		Ga0059261_1706	0.70	-0.3
1,818,502	+		Ga0059261_1706	0.70	+0.2
1,818,502	+		Ga0059261_1706	0.70	-0.8
1,818,503	-		Ga0059261_1706	0.70	-0.0
1,818,503	-		Ga0059261_1706	0.70	+0.3
1,818,503	-		Ga0059261_1706	0.70	-0.6
1,818,503	-		Ga0059261_1706	0.70	+0.0
1,818,503	-		Ga0059261_1706	0.70	-0.4
1,818,538	+		Ga0059261_1706	0.76	+0.1
1,818,538	+		Ga0059261_1706	0.76	+0.1
1,818,539	-		Ga0059261_1706	0.76	-0.0
1,818,539	-		Ga0059261_1706	0.76	+0.3
1,818,539	-		Ga0059261_1706	0.76	-0.0
1,818,539	-		Ga0059261_1706	0.76	-0.7
1,818,565	+		Ga0059261_1706	0.80	-0.1
1,818,565	+		Ga0059261_1706	0.80	+0.1
1,818,565	+		Ga0059261_1706	0.80	-0.3
1,818,565	+		Ga0059261_1706	0.80	-0.0
1,818,565	+		Ga0059261_1706	0.80	-0.4
1,818,566	-		Ga0059261_1706	0.80	-1.3
1,818,566	-		Ga0059261_1706	0.80	-0.7
1,818,566	-		Ga0059261_1706	0.80	+0.3
1,818,566	-		Ga0059261_1706	0.80	+0.8
1,818,566	-		Ga0059261_1706	0.80	-0.1
1,818,566	-		Ga0059261_1706	0.80	-0.3
1,818,566	-		Ga0059261_1706	0.80	-1.7
1,818,566	-		Ga0059261_1706	0.80	-0.4
1,818,608	+		Ga0059261_1706	0.87	+1.0
1,818,608	+		Ga0059261_1706	0.87	-0.5
1,818,608	+		Ga0059261_1706	0.87	-0.5
1,818,608	+		Ga0059261_1706	0.87	+0.6
1,818,608	+		Ga0059261_1706	0.87	-0.5
1,818,609	-		Ga0059261_1706	0.87	-0.3
1,818,609	-		Ga0059261_1706	0.87	-0.7
1,818,609	-		Ga0059261_1706	0.87	-0.1
1,818,844	+				+0.3
1,818,844	+				+0.5
1,818,844	+				-0.2
1,818,845	-				-0.1
1,819,025	+		Ga0059261_1707	0.24	+0.1
1,819,025	+		Ga0059261_1707	0.24	-0.1
1,819,026	-		Ga0059261_1707	0.24	-0.4
1,819,026	-		Ga0059261_1707	0.24	+0.5
1,819,026	-		Ga0059261_1707	0.24	-0.3
1,819,276	+				+1.3
1,819,276	+				+0.8
1,819,276	+				+1.0
1,819,276	+				+1.3
1,819,277	-				-0.4
1,819,277	-				-0.4
1,819,277	-				-1.8
1,819,277	-				-0.2
1,819,277	-				-0.0
1,819,481	+		Ga0059261_1708	0.57	-0.8
1,819,481	+		Ga0059261_1708	0.57	+0.0
1,819,481	+		Ga0059261_1708	0.57	+0.2
1,819,481	+		Ga0059261_1708	0.57	+0.2
1,819,481	+		Ga0059261_1708	0.57	-1.2
1,819,481	+		Ga0059261_1708	0.57	+0.9
1,819,481	+		Ga0059261_1708	0.57	-0.2
1,819,481	+		Ga0059261_1708	0.57	-0.5
1,819,481	+		Ga0059261_1708	0.57	-0.6
1,819,482	-		Ga0059261_1708	0.57	+0.2
1,819,482	-		Ga0059261_1708	0.57	+0.0
1,819,482	-		Ga0059261_1708	0.57	+0.3
1,819,482	-		Ga0059261_1708	0.57	+0.3
1,819,482	-		Ga0059261_1708	0.57	-0.4
1,819,482	-		Ga0059261_1708	0.57	-0.2
1,819,482	-		Ga0059261_1708	0.57	-0.5
1,819,530	-		Ga0059261_1708	0.75	-1.0
1,819,530	-		Ga0059261_1708	0.75	-0.6
1,819,532	+		Ga0059261_1708	0.76	-0.2
1,819,532	+		Ga0059261_1708	0.76	-0.1
1,819,532	+		Ga0059261_1708	0.76	+0.7
1,819,532	+		Ga0059261_1708	0.76	+0.0
1,819,533	-		Ga0059261_1708	0.76	-0.2
1,819,533	-		Ga0059261_1708	0.76	+1.5
1,819,533	-		Ga0059261_1708	0.76	+1.0
1,819,533	-		Ga0059261_1708	0.76	-0.8
1,819,535	+				+1.0
1,819,535	+		Ga0059261_1708	0.77	+0.4
1,819,535	+		Ga0059261_1708	0.77	+0.6
1,819,535	+		Ga0059261_1708	0.77	-0.1
1,819,535	+		Ga0059261_1708	0.77	+0.5
1,819,535	+		Ga0059261_1708	0.77	-0.4
1,819,535	+		Ga0059261_1708	0.77	+2.4
1,819,535	+		Ga0059261_1708	0.77	+0.6
1,819,535	+		Ga0059261_1708	0.77	-0.3
1,819,535	+		Ga0059261_1708	0.77	+0.7
1,819,535	+		Ga0059261_1708	0.77	-1.0
1,819,535	+		Ga0059261_1708	0.77	+0.7
1,819,535	+		Ga0059261_1708	0.77	+0.9
1,819,535	+		Ga0059261_1708	0.77	+0.8
1,819,535	+		Ga0059261_1708	0.77	-0.2
1,819,535	+		Ga0059261_1708	0.77	-1.0
1,819,535	+		Ga0059261_1708	0.77	-1.1
1,819,535	+		Ga0059261_1708	0.77	+0.4
1,819,535	+		Ga0059261_1708	0.77	-1.0
1,819,535	+		Ga0059261_1708	0.77	-0.1
1,819,535	+		Ga0059261_1708	0.77	-0.4
1,819,535	+		Ga0059261_1708	0.77	-0.4
1,819,535	+		Ga0059261_1708	0.77	-1.4
1,819,535	+		Ga0059261_1708	0.77	-0.0
1,819,535	+		Ga0059261_1708	0.77	+0.3
1,819,535	+		Ga0059261_1708	0.77	-0.3
1,819,535	+		Ga0059261_1708	0.77	+0.2
1,819,535	+		Ga0059261_1708	0.77	-0.1
1,819,535	+		Ga0059261_1708	0.77	-0.2
1,819,535	+		Ga0059261_1708	0.77	+0.3
1,819,535	+		Ga0059261_1708	0.77	-0.2
1,819,536	-		Ga0059261_1708	0.77	+0.0
1,819,536	-		Ga0059261_1708	0.77	-0.1
1,819,536	-		Ga0059261_1708	0.77	+1.0
1,819,536	-		Ga0059261_1708	0.77	-0.7
1,819,536	-		Ga0059261_1708	0.77	+1.0
1,819,536	-		Ga0059261_1708	0.77	-0.4
1,819,536	-		Ga0059261_1708	0.77	+0.0
1,819,536	-		Ga0059261_1708	0.77	-0.4
1,819,536	-		Ga0059261_1708	0.77	-0.4
1,819,536	-		Ga0059261_1708	0.77	-0.1
1,819,536	-		Ga0059261_1708	0.77	-0.8
1,819,536	-		Ga0059261_1708	0.77	-1.1
1,819,536	-		Ga0059261_1708	0.77	-0.2
1,819,536	-		Ga0059261_1708	0.77	+0.2
1,819,536	-		Ga0059261_1708	0.77	-0.8
1,819,536	-		Ga0059261_1708	0.77	-0.3
1,819,536	-		Ga0059261_1708	0.77	+0.0
1,819,557	+		Ga0059261_1708	0.85	-0.7
1,819,557	+		Ga0059261_1708	0.85	-0.3
1,819,557	+		Ga0059261_1708	0.85	-0.1
1,819,557	+		Ga0059261_1708	0.85	+0.1
1,819,557	+		Ga0059261_1708	0.85	-0.5
1,819,558	-		Ga0059261_1708	0.86	-0.2
1,819,558	-		Ga0059261_1708	0.86	+1.5
1,819,558	-		Ga0059261_1708	0.86	-0.9
1,819,558	-		Ga0059261_1708	0.86	-0.4
1,819,558	-		Ga0059261_1708	0.86	-0.4
1,819,559	+		Ga0059261_1708	0.86	-0.4
1,819,559	+		Ga0059261_1708	0.86	+0.0
1,819,560	-		Ga0059261_1708	0.86	+0.0
1,819,560	-		Ga0059261_1708	0.86	+0.2
1,819,560	-		Ga0059261_1708	0.86	-0.3
1,819,829	+				-0.5
1,819,829	+				+0.5
1,819,829	+				-0.9
1,819,829	+				+0.2
1,819,829	+				+1.4
1,819,829	+				-0.1
1,819,830	-				-0.2
1,819,830	-				-0.1
1,819,830	-				-0.6
1,819,830	-				+0.5
1,819,830	-				+0.2
1,819,830	-				+0.0
1,819,830	-				-1.0
1,819,830	-				-0.0
1,819,830	-				-0.3
1,819,830	-				+0.0
1,819,830	-				+0.5
1,820,008	+				+0.8
1,820,008	+				-0.2
1,820,008	+				-1.0
1,820,009	-				-0.2
1,820,009	-				+0.0
1,820,009	-				-0.4
1,820,009	-				-0.7
1,820,047	+				+0.8
1,820,047	+				-0.3
1,820,047	+				-1.1
1,820,047	+				+0.5
1,820,047	+				-0.8
1,820,047	+				+1.0
1,820,047	+				-0.0
1,820,075	+				-0.0
1,820,075	+				-1.6
1,820,076	-				-0.1
1,820,076	-				-0.4
1,820,076	-				+0.6
1,820,076	-				-1.0
1,820,076	-				+0.6
1,820,076	-				+0.3
1,820,392	+				+0.8
1,820,392	+				-0.4
1,820,392	+				-0.1
1,820,393	-				+0.5
1,820,393	-				+0.7
1,820,393	-				+0.9
1,820,436	+				-1.0
1,820,437	-				+0.6
1,820,437	-				-0.4
1,820,437	-				-1.3
1,820,506	+				-1.5
1,820,506	+				-0.9
1,820,507	-				+0.1
1,820,507	-				-1.1
1,820,507	-				+0.5
1,820,507	-				+1.0
1,820,529	+				-0.1
1,820,530	-				-0.2
1,820,530	-				-1.2
1,820,530	-				+0.4
1,820,530	-				+0.1
1,820,530	-				+1.2
1,820,530	-				-0.5
1,820,530	-				-0.1